Information for motif18


Reverse Opposite:

p-value:1e-30
log p-value:-6.944e+01
Information Content per bp:1.706
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets143.7 +/- 64.8bp
Average Position of motif in Background175.6 +/- 70.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0497.1_MEF2C/Jaspar

Match Rank:1
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:TGCTATTTTAAG---
TTCTATTTTTAGNNN

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:TGCTATTTTAAG-
-KCTATTTTTRGH

MA0052.2_MEF2A/Jaspar

Match Rank:3
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-TGCTATTTTAAG--
NNGCTATTTTTAGCN

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer

Match Rank:4
Score:0.83
Offset:2
Orientation:reverse strand
Alignment:TGCTATTTTAAG
--CTATTTTTGG

PB0146.1_Mafk_2/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TGCTATTTTAAG
CCTTGCAATTTTTNN

MA0033.1_FOXL1/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TGCTATTTTAAG
---TATGTNTA-

PB0119.1_Foxa2_2/Jaspar

Match Rank:7
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TGCTATTTTAAG
NCNTTTGTTATTTNN--

PB0123.1_Foxl1_2/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGCTATTTTAAG--
NNTTTTGTTTTGATNT

MF0008.1_MADS_class/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TGCTATTTTAAG
--CCATATATGG

PB0122.1_Foxk1_2/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TGCTATTTTAAG
NNNTGTTGTTGTTNG