Information for motif21


Reverse Opposite:

p-value:1e-26
log p-value:-6.016e+01
Information Content per bp:1.506
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets157.7 +/- 79.2bp
Average Position of motif in Background120.2 +/- 56.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCAGAGTCA
BCAGACWA-----

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CAGCCAGAGTCA
ATGCCAGACN--

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCAGAGTCA
CCAGACAG-----

MA0099.2_JUN::FOS/Jaspar

Match Rank:4
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CAGCCAGAGTCA
-----TGAGTCA

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CAGCCAGAGTCA
--TGCTGAGTCA

MA0477.1_FOSL1/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CAGCCAGAGTCA--
---NATGAGTCACC

MA0161.1_NFIC/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CAGCCAGAGTCA
-TGCCAA-----

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CAGCCAGAGTCA-
---GATGAGTCAT

MA0592.1_ESRRA/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CAGCCAGAGTCA--
---CCAAGGTCACA

MA0478.1_FOSL2/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CAGCCAGAGTCA---
----NTGAGTCATCN