Information for motif23


Reverse Opposite:

p-value:1e-21
log p-value:-5.009e+01
Information Content per bp:1.970
Number of Target Sequences with motif160.0
Percentage of Target Sequences with motif3.66%
Number of Background Sequences with motif54.9
Percentage of Background Sequences with motif1.56%
Average Position of motif in Targets139.5 +/- 81.8bp
Average Position of motif in Background170.4 +/- 86.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.77
Offset:3
Orientation:forward strand
Alignment:TTGGCTCC-
---GCTCCG

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----TTGGCTCC-----
NNNNTTGGCGCCGANNN

MA0161.1_NFIC/Jaspar

Match Rank:3
Score:0.74
Offset:0
Orientation:forward strand
Alignment:TTGGCTCC
TTGGCA--

PB0113.1_E2F3_2/Jaspar

Match Rank:4
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----TTGGCTCC-----
NNNNTTGGCGCCGANNN

NFY(CCAAT)/Promoter/Homer

Match Rank:5
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TTGGCTCC
CCGATTGGCT--

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TTGGCTCC-
TGATTGGCTANN

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TTGGCTCC
--NGCTN-

PB0203.1_Zfp691_2/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TTGGCTCC------
TACGAGACTCCTCTAAC

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TTGGCTCC
TWGTCTGV

MA0502.1_NFYB/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TTGGCTCC---
CTGATTGGTCNATTT