Information for motif25


Reverse Opposite:

p-value:1e-15
log p-value:-3.514e+01
Information Content per bp:1.530
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets148.6 +/- 92.5bp
Average Position of motif in Background244.8 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GTAGTGAT--
GCAGTGATTT

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GTAGTGAT--
NTATYGATCH

MA0027.1_En1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GTAGTGAT-
AAGTAGTGCCC

MA0038.1_Gfi1/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GTAGTGAT---
-CNGTGATTTN

MA0596.1_SREBF2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GTAGTGAT
ATGGGGTGAT

MA0483.1_Gfi1b/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GTAGTGAT--
TGCTGTGATTT

PH0017.1_Cux1_2/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GTAGTGAT--------
-TAGTGATCATCATTA

Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GTAGTGAT
ATGGGGTGAT

MA0032.1_FOXC1/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GTAGTGAT
GGTAAGTA-----

PB0120.1_Foxj1_2/Jaspar

Match Rank:10
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GTAGTGAT--
GTNTTGTTGTGANNT