Information for motif29


Reverse Opposite:

p-value:1e-12
log p-value:-2.966e+01
Information Content per bp:1.952
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif8.1
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets135.3 +/- 79.8bp
Average Position of motif in Background131.6 +/- 82.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0155.1_Osr2_2/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GCTAGTAG-----
NNTGTAGGTAGCANNT

PB0154.1_Osr1_2/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GCTAGTAG-----
NNNTTAGGTAGCNTNT

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GCTAGTAG
AAGGCAAGTGT

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCTAGTAG
NGCTN----

PH0040.1_Hmbox1/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GCTAGTAG-----
GAAAACTAGTTAACATC

MA0032.1_FOXC1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCTAGTAG
GGTAAGTA-

MA0027.1_En1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCTAGTAG-----
--AAGTAGTGCCC

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GCTAGTAG-
-CTAATKGV

PH0168.1_Hnf1b/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GCTAGTAG------
ANNNCTAGTTAACNGNN

MA0132.1_Pdx1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GCTAGTAG
-CTAATT-