Information for motif32


Reverse Opposite:

p-value:1e-8
log p-value:-1.951e+01
Information Content per bp:1.530
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets133.5 +/- 72.9bp
Average Position of motif in Background141.3 +/- 51.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CGCTCTGG---
-GGTCTGGCAT

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CGCTCTGG
-GCTCCG-

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CGCTCTGG
NGCTN---

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CGCTCTGG---
-GCTGTGGTTT

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CGCTCTGG
CTGTCTGG

MA0002.2_RUNX1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CGCTCTGG---
GTCTGTGGTTT

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CGCTCTGG-----
NNTNNTGTCTGGNNTNG

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CGCTCTGG
VBSYGTCTGG

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CGCTCTGG----
NNHTGTGGTTWN

MA0154.2_EBF1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CGCTCTGG----
-TCCCTGGGGAN