Information for motif5


Reverse Opposite:

p-value:1e-78
log p-value:-1.800e+02
Information Content per bp:1.782
Number of Target Sequences with motif421.0
Percentage of Target Sequences with motif9.64%
Number of Background Sequences with motif119.2
Percentage of Background Sequences with motif3.39%
Average Position of motif in Targets149.9 +/- 70.2bp
Average Position of motif in Background144.8 +/- 94.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.97
Offset:0
Orientation:forward strand
Alignment:CWAACCACAA
NAAACCACAG

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.97
Offset:1
Orientation:forward strand
Alignment:CWAACCACAA-
-AAACCACANN

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.96
Offset:0
Orientation:forward strand
Alignment:CWAACCACAA--
NWAACCACADNN

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:4
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:CWAACCACAA-
-AAACCACAGC

MA0002.2_RUNX1/Jaspar

Match Rank:5
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:CWAACCACAA--
-AAACCACAGAN

MA0511.1_RUNX2/Jaspar

Match Rank:6
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:CWAACCACAA-----
CAAACCACAAACCCC

MA0130.1_ZNF354C/Jaspar

Match Rank:7
Score:0.72
Offset:2
Orientation:forward strand
Alignment:CWAACCACAA
--ATCCAC--

MA0479.1_FOXH1/Jaspar

Match Rank:8
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CWAACCACAA
TCCAATCCACA-

PB0122.1_Foxk1_2/Jaspar

Match Rank:9
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CWAACCACAA-----
CAAACAACAACACCT

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CWAACCACAA-
SSAATCCACANN