| p-value: | 1e-51 |
| log p-value: | -1.180e+02 |
| Information Content per bp: | 1.715 |
| Number of Target Sequences with motif | 52.0 |
| Percentage of Target Sequences with motif | 5.29% |
| Number of Background Sequences with motif | 1.6 |
| Percentage of Background Sequences with motif | 0.37% |
| Average Position of motif in Targets | 127.7 +/- 91.7bp |
| Average Position of motif in Background | 127.5 +/- 55.0bp |
| Strand Bias (log2 ratio + to - strand density) | 0.1 |
| Multiplicity (# of sites on avg that occur together) | 1.02 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
| Match Rank: | 1 |
| Score: | 0.62
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | CTTTGGCAGC
-CTTGGCAA- |
|
|
|
POL010.1_DCE_S_III/Jaspar
| Match Rank: | 2 |
| Score: | 0.62
| | Offset: | 6
| | Orientation: | forward strand |
| Alignment: | CTTTGGCAGC-
------CAGCC |
|
|
|
MA0161.1_NFIC/Jaspar
| Match Rank: | 3 |
| Score: | 0.59
| | Offset: | 2
| | Orientation: | forward strand |
| Alignment: | CTTTGGCAGC
--TTGGCA-- |
|
|
|
PB0154.1_Osr1_2/Jaspar
| Match Rank: | 4 |
| Score: | 0.58
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --CTTTGGCAGC----
NNNTTAGGTAGCNTNT |
|
|
|
POL013.1_MED-1/Jaspar
| Match Rank: | 5 |
| Score: | 0.57
| | Offset: | 4
| | Orientation: | reverse strand |
| Alignment: | CTTTGGCAGC
----CGGAGC |
|
|
|
POL008.1_DCE_S_I/Jaspar
| Match Rank: | 6 |
| Score: | 0.56
| | Offset: | 4
| | Orientation: | reverse strand |
| Alignment: | CTTTGGCAGC
----NGAAGC |
|
|
|
PH0158.1_Rhox11_2/Jaspar
| Match Rank: | 7 |
| Score: | 0.55
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --CTTTGGCAGC-----
TCNCTTTACAGCGNNNT |
|
|
|
TATA-Box(TBP)/Promoter/Homer
| Match Rank: | 8 |
| Score: | 0.55
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -CTTTGGCAGC-
CCTTTTATAGNC |
|
|
|
MA0509.1_Rfx1/Jaspar
| Match Rank: | 9 |
| Score: | 0.55
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----CTTTGGCAGC
GTTGCCATGGCAAC |
|
|
|
PH0170.1_Tgif2/Jaspar
| Match Rank: | 10 |
| Score: | 0.55
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -CTTTGGCAGC-----
GTATTGACAGCTNNTT |
|
|
|
