Information for motif17


Reverse Opposite:

p-value:1e-40
log p-value:-9.301e+01
Information Content per bp:1.530
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif4.48%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets149.0 +/- 84.9bp
Average Position of motif in Background63.6 +/- 3.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CGAGCGAT--
DGATCRATAN

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CGAGCGAT
-CAGCC--

PB0008.1_E2F2_1/Jaspar

Match Rank:3
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------CGAGCGAT
ATAAAGGCGCGCGAT

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CGAGCGAT
CGGAGC---

PB0009.1_E2F3_1/Jaspar

Match Rank:5
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------CGAGCGAT
ATAAGGGCGCGCGAT

PB0139.1_Irf5_2/Jaspar

Match Rank:6
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CGAGCGAT--
TTGACCGAGAATTCC

PH0041.1_Hmx1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CGAGCGAT--------
ACAAGCAATTAATGAAT

PH0043.1_Hmx3/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CGAGCGAT--------
ACAAGCAATTAAAGAAT

PH0044.1_Homez/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CGAGCGAT-----
NNTAAAAACGATGTTNT

MA0038.1_Gfi1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CGAGCGAT---
-CNGTGATTTN