Information for motif20


Reverse Opposite:

p-value:1e-37
log p-value:-8.708e+01
Information Content per bp:1.759
Number of Target Sequences with motif62.0
Percentage of Target Sequences with motif6.31%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.90%
Average Position of motif in Targets140.3 +/- 76.5bp
Average Position of motif in Background137.6 +/- 45.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0102.3_CEBPA/Jaspar

Match Rank:1
Score:0.88
Offset:0
Orientation:forward strand
Alignment:ATTTCACAAT-
ATTGCACAATA

MA0466.1_CEBPB/Jaspar

Match Rank:2
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-ATTTCACAAT
TATTGCACAAT

CEBP(bZIP)/CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.82
Offset:0
Orientation:forward strand
Alignment:ATTTCACAAT
ATTGCGCAAC

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:4
Score:0.77
Offset:0
Orientation:forward strand
Alignment:ATTTCACAAT
ATTGCATAA-

MA0043.1_HLF/Jaspar

Match Rank:5
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-ATTTCACAAT-
GGTTACGCAATA

Pax7-longest(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:6
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---ATTTCACAAT-------
NTAATTDGCYAATTANNWWD

MA0025.1_NFIL3/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ATTTCACAAT
ANGTTACATAA-

MA0084.1_SRY/Jaspar

Match Rank:8
Score:0.63
Offset:1
Orientation:forward strand
Alignment:ATTTCACAAT
-GTAAACAAT

PB0013.1_Eomes_1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ATTTCACAAT-----
NNTTTTCACACCTTNNN

PB0145.1_Mafb_2/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ATTTCACAAT---
CAATTGCAAAAATAT