Information for motif25


Reverse Opposite:

p-value:1e-33
log p-value:-7.814e+01
Information Content per bp:1.530
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif3.97%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets124.8 +/- 90.5bp
Average Position of motif in Background27.4 +/- 15.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0077.1_Hoxd12/Jaspar

Match Rank:1
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------TTTCGACG---
NNNATTTTACGACNNTN

PB0006.1_Bcl6b_1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TTTCGACG------
TCTTTCGAGGAATTTG

PH0076.1_Hoxd11/Jaspar

Match Rank:3
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------TTTCGACG---
ANNATTTTACGACNTNA

PH0067.1_Hoxc12/Jaspar

Match Rank:4
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------TTTCGACG---
GNNNTTTTACGACCTNA

PB0034.1_Irf4_1/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TTTCGACG--
TNTGGTTTCGATACN

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TTTCGACG
ATTTTCCATT

PH0066.1_Hoxc11/Jaspar

Match Rank:7
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TTTCGACG---
NNNTTTTACGACNTTN

PH0065.1_Hoxc10/Jaspar

Match Rank:8
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TTTCGACG---
ANNTTTTACGACNTNN

PB0036.1_Irf6_1/Jaspar

Match Rank:9
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------TTTCGACG--
NNNTTGGTTTCGNTNNN

PB0179.1_Sp100_2/Jaspar

Match Rank:10
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TTTCGACG--
NNTTTANNCGACGNA