Information for motif27


Reverse Opposite:

p-value:1e-31
log p-value:-7.205e+01
Information Content per bp:1.530
Number of Target Sequences with motif170.0
Percentage of Target Sequences with motif17.29%
Number of Background Sequences with motif28.8
Percentage of Background Sequences with motif6.53%
Average Position of motif in Targets159.1 +/- 84.1bp
Average Position of motif in Background174.4 +/- 77.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0033.1_Irf3_1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GGTTCGTTTC--
CAGTTTCGNTTCTN

PB0037.1_Isgf3g_1/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GGTTCGTTTC--
TNAGTTTCGATTTTN

T1ISRE(IRF)/Ifnb-Exp/Homer

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGTTCGTTTC-
ACTTTCGTTTCT

PB0035.1_Irf5_1/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GGTTCGTTTC--
NTGGTTTCGGTTNNN

PB0034.1_Irf4_1/Jaspar

Match Rank:5
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GGTTCGTTTC-
TNTGGTTTCGATACN

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GGTTCGTTTC---
---TGGTTTCAGT

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGTTCGTTTC--
GTTTCACTTCCG

PB0036.1_Irf6_1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGTTCGTTTC------
NNNTTGGTTTCGNTNNN

MA0517.1_STAT2::STAT1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GGTTCGTTTC--
TCAGTTTCATTTTCC

MA0041.1_Foxd3/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GGTTCGTTTC
GAATGTTTGTTT-