Information for motif28


Reverse Opposite:

p-value:1e-29
log p-value:-6.696e+01
Information Content per bp:1.667
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif4.58%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.57%
Average Position of motif in Targets134.1 +/- 86.9bp
Average Position of motif in Background125.1 +/- 58.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0100.2_Myb/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CAAAACTGAC-
-CCAACTGCCA

BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CAAAACTGAC-
-NHAACBGYYV

PB0037.1_Isgf3g_1/Jaspar

Match Rank:3
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------CAAAACTGAC
CAAAATCGAAACTAA-

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CAAAACTGAC-
---AACCGANA

PB0149.1_Myb_2/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CAAAACTGAC----
CGACCAACTGCCATGC

PB0121.1_Foxj3_2/Jaspar

Match Rank:6
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CAAAACTGAC--
AACACCAAAACAAAGGA

MA0133.1_BRCA1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CAAAACTGAC
ACAACAC----

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CAAAACTGAC
--YAACBGCC

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CAAAACTGAC-
-CCAACTGCCA

PB0150.1_Mybl1_2/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAAAACTGAC---
CGACCAACTGCCGTG