Information for motif4


Reverse Opposite:

p-value:1e-86
log p-value:-2.001e+02
Information Content per bp:1.620
Number of Target Sequences with motif76.0
Percentage of Target Sequences with motif7.73%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets152.2 +/- 76.9bp
Average Position of motif in Background55.0 +/- 3.0bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.71
Offset:5
Orientation:forward strand
Alignment:CCGCGGCTCCCG
-----GCTCCG-

PB0052.1_Plagl1_1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CCGCGGCTCCCG---
NNNGGGGCGCCCCCNN

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CCGCGGCTCCCG
----GGCGCGCT

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCGCGGCTCCCG
-CNGTCCTCCC-

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CCGCGGCTCCCG
----NGCTN---

PB0113.1_E2F3_2/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCGCGGCTCCCG----
AGCTCGGCGCCAAAAGC

MA0048.1_NHLH1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CCGCGGCTCCCG
NCGCAGCTGCGN

MA0599.1_KLF5/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CCGCGGCTCCCG
--GCCCCGCCCC

POL011.1_XCPE1/Jaspar

Match Rank:9
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CCGCGGCTCCCG---
-----GGTCCCGCCC

MA0162.2_EGR1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CCGCGGCTCCCG--
CCCCCGCCCCCGCC