Information for motif5


Reverse Opposite:

p-value:1e-79
log p-value:-1.823e+02
Information Content per bp:1.875
Number of Target Sequences with motif71.0
Percentage of Target Sequences with motif7.22%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets139.4 +/- 90.0bp
Average Position of motif in Background199.9 +/- 62.3bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0527.1_ZBTB33/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CCTCGCGACG----
CTCTCGCGAGATCTG

PB0147.1_Max_2/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CCTCGCGACG-
GTGCCACGCGACTG

GFX(?)/Promoter/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCTCGCGACG--
TCTCGCGAGAAT

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CCTCGCGACG--
GGNTCTCGCGAGAAC

MA0024.2_E2F1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCTCGCGACG-
CCTCCCGCCCN

PB0179.1_Sp100_2/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CCTCGCGACG--------
---TCCGTCGCTTAAAAG

MA0470.1_E2F4/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCTCGCGACG
NNTTCCCGCCC

PB0055.1_Rfx4_1/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CCTCGCGACG--
TACCATAGCAACGGT

MA0469.1_E2F3/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CCTCGCGACG------
-CTCCCGCCCCCACTC

Usf2(HLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCTCGCGACG
ACCACGTGAC-