Information for motif12


Reverse Opposite:

p-value:1e-172
log p-value:-3.972e+02
Information Content per bp:1.599
Number of Target Sequences with motif137.0
Percentage of Target Sequences with motif6.11%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets158.3 +/- 90.5bp
Average Position of motif in Background168.5 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0010.1_Egr1_1/Jaspar

Match Rank:1
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-AAGCGGGAGCGG-
ANTGCGGGGGCGGN

MA0162.2_EGR1/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:AAGCGGGAGCGG---
-GGCGGGGGCGGGGG

MA0471.1_E2F6/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AAGCGGGAGCGG
GGGCGGGAAGG-

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AAGCGGGAGCGG
-GGCGGGAARN-

MA0469.1_E2F3/Jaspar

Match Rank:5
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------AAGCGGGAGCGG
NNGTGNGGGCGGGAG---

MA0024.2_E2F1/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AAGCGGGAGCGG
CGGGCGGGAGG--

MA0470.1_E2F4/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AAGCGGGAGCGG
GGGCGGGAAGG-

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.66
Offset:4
Orientation:forward strand
Alignment:AAGCGGGAGCGG
----GGGGGGGG

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:AAGCGGGAGCGG
----CGGAGC--

MA0599.1_KLF5/Jaspar

Match Rank:10
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:AAGCGGGAGCGG-
---GGGGNGGGGC