Information for motif13


Reverse Opposite:

p-value:1e-163
log p-value:-3.755e+02
Information Content per bp:1.543
Number of Target Sequences with motif272.0
Percentage of Target Sequences with motif12.13%
Number of Background Sequences with motif10.9
Percentage of Background Sequences with motif1.45%
Average Position of motif in Targets145.6 +/- 83.4bp
Average Position of motif in Background80.9 +/- 119.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:TCGGCGCGAT
--GGCGCGCT

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TCGGCGCGAT----
CCTTCGGCGCCAAAAGG

PB0113.1_E2F3_2/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TCGGCGCGAT----
AGCTCGGCGCCAAAAGC

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TCGGCGCGAT--
--GGCGGGAAAH

MA0470.1_E2F4/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TCGGCGCGAT--
-GGGCGGGAAGG

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TCGGCGCGAT
-CGGAGC---

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TCGGCGCGAT---
-TGGCGGGAAAHB

MA0024.2_E2F1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TCGGCGCGAT-
CGGGCGGGAGG

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TCGGCGCGAT--
--GGCGGGAARN

PB0199.1_Zfp161_2/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TCGGCGCGAT
NNGCNCTGCGCGGC