Information for motif15


Reverse Opposite:

p-value:1e-147
log p-value:-3.397e+02
Information Content per bp:1.890
Number of Target Sequences with motif246.0
Percentage of Target Sequences with motif10.97%
Number of Background Sequences with motif9.0
Percentage of Background Sequences with motif1.20%
Average Position of motif in Targets156.6 +/- 86.6bp
Average Position of motif in Background189.1 +/- 60.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--AGAKGGCGGCMG
CAAGATGGCGGC--

MA0095.2_YY1/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--AGAKGGCGGCMG
CAAGATGGCGGC--

MA0024.2_E2F1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AGAKGGCGGCMG-
--CGGGCGGGAGG

MA0469.1_E2F3/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AGAKGGCGGCMG
NNGTGNGGGCGGGAG

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------AGAKGGCGGCMG--
GCCASCAGGGGGCGCYVNNG

MA0461.1_Atoh1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGAKGGCGGCMG
CAGATGGC-----

PB0076.1_Sp4_1/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AGAKGGCGGCMG-
NNNAAGGGGGCGGGNNN

MA0162.2_EGR1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGAKGGCGGCMG
GGCGGGGGCGGGGG

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---AGAKGGCGGCMG
AACAGATGGC-----

MA0139.1_CTCF/Jaspar

Match Rank:10
Score:0.56
Offset:-8
Orientation:forward strand
Alignment:--------AGAKGGCGGCMG
TGGCCACCAGGGGGCGCTA-