Information for motif17


Reverse Opposite:

p-value:1e-123
log p-value:-2.843e+02
Information Content per bp:1.938
Number of Target Sequences with motif107.0
Percentage of Target Sequences with motif4.77%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets129.2 +/- 82.1bp
Average Position of motif in Background113.5 +/- 66.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCCCC
CGGAGC---

PB0052.1_Plagl1_1/Jaspar

Match Rank:2
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----GGAGCCCC---
TTGGGGGCGCCCCTAG

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GGAGCCCC
-CAGCC--

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCCCC-
GGGAGGACNG

PB0025.1_Glis2_1/Jaspar

Match Rank:5
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GGAGCCCC-----
TATCGACCCCCCACAG

PB0203.1_Zfp691_2/Jaspar

Match Rank:6
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------GGAGCCCC---
NTNNNAGGAGTCTCNTN

PB0156.1_Plagl1_2/Jaspar

Match Rank:7
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GGAGCCCC----
NNNNGGTACCCCCCANN

PB0099.1_Zfp691_1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GGAGCCCC-----
NNNNTGAGCACTGTNNG

PB0009.1_E2F3_1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGAGCCCC-----
ANCGCGCGCCCTTNN

NFkB-p50,p52(RHD)/p50-ChIP-Chip(Schreiber et al.)/Homer

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GGAGCCCC-
GGGGGAATCCCC