Information for motif18


Reverse Opposite:

p-value:1e-117
log p-value:-2.698e+02
Information Content per bp:1.530
Number of Target Sequences with motif298.0
Percentage of Target Sequences with motif13.29%
Number of Background Sequences with motif19.4
Percentage of Background Sequences with motif2.59%
Average Position of motif in Targets153.9 +/- 87.9bp
Average Position of motif in Background155.1 +/- 44.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F(E2F)/Cell-Cycle-Exp/Homer

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GTCGCGAAAG
TTCGCGCGAAAA

MA0527.1_ZBTB33/Jaspar

Match Rank:2
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----GTCGCGAAAG
NAGNTCTCGCGAGAN

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GTCGCGAAAG-
TGGCGGGAAAHB

GFX(?)/Promoter/Homer

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GTCGCGAAAG
ATTCTCGCGAGA-

PB0179.1_Sp100_2/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GTCGCGAAAG--
TCCGTCGCTTAAAAG

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GTCGCGAAAG--
GTTCTCGCGAGANCC

PH0076.1_Hoxd11/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GTCGCGAAAG---
TAAGGTCGTAAAATCCT

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTCGCGAAAG
GGCGGGAAAH

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GTCGCGAAAG
CWGGCGGGAA--

MA0470.1_E2F4/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GTCGCGAAAG
GGGCGGGAAGG