Information for motif19


Reverse Opposite:

p-value:1e-98
log p-value:-2.258e+02
Information Content per bp:1.530
Number of Target Sequences with motif141.0
Percentage of Target Sequences with motif6.29%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.60%
Average Position of motif in Targets143.0 +/- 84.6bp
Average Position of motif in Background171.5 +/- 35.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0079.3_SP1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GCACCTCCCCCG
GCCCCGCCCCC-

MA0162.2_EGR1/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GCACCTCCCCCG--
CCCCCGCCCCCGCC

Sp1(Zf)/Promoter/Homer

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GCACCTCCCCCG
GGCCCCGCCCCC-

POL003.1_GC-box/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GCACCTCCCCCG
NAGCCCCGCCCCCN

PB0010.1_Egr1_1/Jaspar

Match Rank:5
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GCACCTCCCCCG----
--TCCGCCCCCGCATT

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GCACCTCCCCCG
---CCCCCCCC-

MA0599.1_KLF5/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GCACCTCCCCCG
GCCCCGCCCC--

MA0516.1_SP2/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GCACCTCCCCCG---
GCCCCGCCCCCTCCC

PB0097.1_Zfp281_1/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCACCTCCCCCG--
TCCCCCCCCCCCCCC

MA0056.1_MZF1_1-4/Jaspar

Match Rank:10
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:GCACCTCCCCCG
-----TCCCCA-