Information for motif20


Reverse Opposite:

p-value:1e-87
log p-value:-2.007e+02
Information Content per bp:1.909
Number of Target Sequences with motif308.0
Percentage of Target Sequences with motif13.74%
Number of Background Sequences with motif27.9
Percentage of Background Sequences with motif3.72%
Average Position of motif in Targets148.8 +/- 80.3bp
Average Position of motif in Background171.5 +/- 139.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0179.1_Sp100_2/Jaspar

Match Rank:1
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCGGCGACTA----
TCCGTCGCTTAAAAG

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:2
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CCGGCGACTA-
ANTGCCTGAGGCAAN

PB0140.1_Irf6_2/Jaspar

Match Rank:3
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CCGGCGACTA--
NNNACCGAGAGTNNN

PB0147.1_Max_2/Jaspar

Match Rank:4
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CCGGCGACTA
GTGCCACGCGACTG

PAX3:FKHR-fusion(Paired/Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CCGGCGACTA-----
ACCGTGACTAATTNN

PB0113.1_E2F3_2/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CCGGCGACTA----
AGCTCGGCGCCAAAAGC

PB0112.1_E2F2_2/Jaspar

Match Rank:7
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CCGGCGACTA----
CCTTCGGCGCCAAAAGG

PB0138.1_Irf4_2/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CCGGCGACTA--
GNNACCGAGAATNNN

PB0154.1_Osr1_2/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CCGGCGACTA-----
ACATGCTACCTAATAC

PB0032.1_IRC900814_1/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CCGGCGACTA-----
ATTTACGACAAATAGC