Information for motif22


Reverse Opposite:

p-value:1e-71
log p-value:-1.649e+02
Information Content per bp:1.530
Number of Target Sequences with motif104.0
Percentage of Target Sequences with motif4.64%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets149.6 +/- 86.7bp
Average Position of motif in Background62.2 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0131.1_HINFP/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCGATCGT--
GCGGACGTTN

MA0077.1_SOX9/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCGATCGT--
-CCATTGTTC

MA0095.2_YY1/Jaspar

Match Rank:3
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GCGATCGT-
GCNGCCATCTTG

YY1(Zf)/Promoter/Homer

Match Rank:4
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GCGATCGT-
GCCGCCATCTTG

PB0051.1_Osr2_1/Jaspar

Match Rank:5
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GCGATCGT----
CNNNGCTACTGTANNN

PH0044.1_Homez/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GCGATCGT-------
AAAACATCGTTTTTAAG

PB0050.1_Osr1_1/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GCGATCGT----
TNNTGCTACTGTNNNN

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GCGATCGT---
-CCATTGTTNY

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GCGATCGT--
NCCATTGTTC

MA0087.1_Sox5/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GCGATCGT--
---ATTGTTA