Information for motif6


Reverse Opposite:

p-value:1e-311
log p-value:-7.165e+02
Information Content per bp:1.775
Number of Target Sequences with motif214.0
Percentage of Target Sequences with motif9.55%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets143.1 +/- 81.4bp
Average Position of motif in Background185.1 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0516.1_SP2/Jaspar

Match Rank:1
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-YYCCGCCTCC----
GCCCCGCCCCCTCCC

MA0079.3_SP1/Jaspar

Match Rank:2
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-YYCCGCCTCC
GCCCCGCCCCC

MA0162.2_EGR1/Jaspar

Match Rank:3
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-YYCCGCCTCC---
CCCCCGCCCCCGCC

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--YYCCGCCTCC
GGCCCCGCCCCC

PB0076.1_Sp4_1/Jaspar

Match Rank:5
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--YYCCGCCTCC-----
GGTCCCGCCCCCTTCTC

POL003.1_GC-box/Jaspar

Match Rank:6
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---YYCCGCCTCC-
NAGCCCCGCCCCCN

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----YYCCGCCTCC---
TACGCCCCGCCACTCTG

MA0469.1_E2F3/Jaspar

Match Rank:8
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-YYCCGCCTCC----
CTCCCGCCCCCACTC

PB0010.1_Egr1_1/Jaspar

Match Rank:9
Score:0.68
Offset:1
Orientation:forward strand
Alignment:YYCCGCCTCC-----
-TCCGCCCCCGCATT

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:10
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-YYCCGCCTCC
TTCCCGCCWG-