Information for motif7


Reverse Opposite:

p-value:1e-311
log p-value:-7.165e+02
Information Content per bp:1.463
Number of Target Sequences with motif281.0
Percentage of Target Sequences with motif12.53%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.47%
Average Position of motif in Targets145.2 +/- 82.1bp
Average Position of motif in Background160.7 +/- 64.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GCTGCGCTGCGC--
GCCGCGCAGTGCGT

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCTGCGCTGCGC--
--GGCCCCGCCCCC

MA0048.1_NHLH1/Jaspar

Match Rank:3
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----GCTGCGCTGCGC
NCGCAGCTGCGN-----

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCTGCGCTGCGC
GCTGTG------

MA0014.2_PAX5/Jaspar

Match Rank:5
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----GCTGCGCTGCGC--
GTCACGCTTGGCTGCNCNN

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------GCTGCGCTGCGC
TCNCCTGCTGNGNNN---

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.51
Offset:-6
Orientation:reverse strand
Alignment:------GCTGCGCTGCGC
TNTCCTGCTGTGNNG---

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GCTGCGCTGCGC---
-NAGCCCCGCCCCCN

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GCTGCGCTGCGC
GCTCCG------

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.50
Offset:-6
Orientation:reverse strand
Alignment:------GCTGCGCTGCGC
NNTCCTGCTGTGNNN---