Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 2243)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 748)	% of Background Sequences with Motif
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e-98	-2.258e+02	0.0000	194.0	8.65%	9.5	1.27%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e-78	-1.803e+02	0.0000	77.0	3.43%	0.8	0.11%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e-74	-1.708e+02	0.0000	281.0	12.53%	26.2	3.50%
Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e-67	-1.545e+02	0.0000	69.0	3.08%	0.3	0.04%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e-56	-1.297e+02	0.0000	327.0	14.59%	41.1	5.49%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e-53	-1.227e+02	0.0000	489.0	21.81%	79.9	10.65%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e-49	-1.140e+02	0.0000	354.0	15.79%	50.3	6.70%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e-47	-1.094e+02	0.0000	183.0	8.16%	17.4	2.31%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e-38	-8.779e+01	0.0000	60.0	2.68%	2.3	0.30%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e-36	-8.370e+01	0.0000	487.0	21.72%	91.7	12.22%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e-35	-8.124e+01	0.0000	360.0	16.06%	60.1	8.02%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e-28	-6.632e+01	0.0000	103.0	4.59%	9.5	1.27%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e-26	-6.165e+01	0.0000	144.0	6.42%	17.0	2.27%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e-24	-5.731e+01	0.0000	279.0	12.44%	48.9	6.52%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e-24	-5.689e+01	0.0000	35.0	1.56%	1.6	0.22%
ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e-24	-5.684e+01	0.0000	46.0	2.05%	2.4	0.31%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e-24	-5.625e+01	0.0000	365.0	16.28%	70.3	9.38%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e-23	-5.493e+01	0.0000	221.0	9.86%	35.7	4.76%
E2F(E2F)/Cell-Cycle-Exp/Homer	TTSGCGCGAAAA	1e-22	-5.197e+01	0.0000	33.0	1.47%	0.3	0.04%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e-22	-5.197e+01	0.0000	33.0	1.47%	0.3	0.04%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e-22	-5.116e+01	0.0000	417.0	18.60%	86.9	11.59%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e-20	-4.761e+01	0.0000	245.0	10.93%	43.4	5.79%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e-19	-4.391e+01	0.0000	80.0	3.57%	8.7	1.16%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e-17	-4.101e+01	0.0000	38.0	1.69%	2.8	0.38%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e-17	-3.921e+01	0.0000	373.0	16.64%	80.3	10.70%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e-16	-3.705e+01	0.0000	85.0	3.79%	10.0	1.33%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e-15	-3.648e+01	0.0000	320.0	14.27%	67.9	9.05%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e-15	-3.622e+01	0.0000	154.0	6.87%	25.9	3.45%
Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e-15	-3.592e+01	0.0000	352.0	15.70%	76.7	10.23%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e-14	-3.452e+01	0.0000	562.0	25.07%	137.2	18.29%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e-14	-3.366e+01	0.0000	526.0	23.46%	127.6	17.01%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer	CTGTTTAC	1e-14	-3.334e+01	0.0000	532.0	23.73%	129.7	17.29%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e-13	-3.189e+01	0.0000	53.0	2.36%	5.9	0.79%
MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e-13	-3.150e+01	0.0000	314.0	14.01%	68.5	9.14%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e-13	-3.123e+01	0.0000	503.0	22.44%	122.9	16.38%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e-12	-2.960e+01	0.0000	115.0	5.13%	18.3	2.44%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e-12	-2.867e+01	0.0000	290.0	12.93%	63.1	8.41%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e-12	-2.857e+01	0.0000	421.0	18.78%	100.6	13.42%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e-12	-2.856e+01	0.0000	164.0	7.31%	30.3	4.05%
HIF-1a(HLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e-12	-2.847e+01	0.0000	91.0	4.06%	13.9	1.86%
PAX5(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e-12	-2.831e+01	0.0000	100.0	4.46%	16.0	2.13%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e-12	-2.795e+01	0.0000	179.0	7.98%	34.9	4.66%
ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER	AGTTTCASTTTC	1e-11	-2.687e+01	0.0000	30.0	1.34%	2.6	0.34%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e-11	-2.567e+01	0.0000	400.0	17.84%	96.7	12.90%
c-Myc(HLH)/LNCAP-cMyc-ChIP-Seq(unpublished)/Homer	VCCACGTG	1e-11	-2.550e+01	0.0000	139.0	6.20%	25.2	3.36%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e-10	-2.436e+01	0.0000	196.0	8.74%	40.5	5.40%
RBPJ:Ebox/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e-10	-2.418e+01	0.0000	86.0	3.84%	13.9	1.86%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e-9	-2.277e+01	0.0000	193.0	8.61%	40.5	5.41%
Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e-9	-2.231e+01	0.0000	294.0	13.11%	68.3	9.11%
STAT6/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e-9	-2.169e+01	0.0000	172.0	7.67%	35.9	4.79%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e-9	-2.150e+01	0.0000	164.0	7.31%	33.6	4.48%
CEBP(bZIP)/CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e-8	-2.047e+01	0.0000	207.0	9.23%	45.8	6.11%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e-8	-2.037e+01	0.0000	261.0	11.64%	60.7	8.10%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e-8	-1.984e+01	0.0000	202.0	9.01%	44.7	5.97%
BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer	NHAACBGYYV	1e-8	-1.949e+01	0.0000	487.0	21.72%	127.7	17.02%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e-8	-1.902e+01	0.0000	409.0	18.24%	104.1	13.88%
MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e-8	-1.868e+01	0.0000	264.0	11.78%	62.8	8.38%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e-7	-1.771e+01	0.0000	134.0	5.98%	27.2	3.62%
NFkB-p65-Rel(RHD)/LPS-exp(GSE23622)/Homer	GGAAATTCCC	1e-7	-1.762e+01	0.0000	24.0	1.07%	2.3	0.30%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e-7	-1.643e+01	0.0000	63.0	2.81%	10.1	1.35%
Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e-6	-1.586e+01	0.0000	671.0	29.93%	188.9	25.19%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e-6	-1.519e+01	0.0000	57.0	2.54%	9.2	1.23%
E-box(HLH)/Promoter/Homer	SSGGTCACGTGA	1e-6	-1.512e+01	0.0000	28.0	1.25%	3.5	0.46%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e-6	-1.493e+01	0.0000	43.0	1.92%	7.0	0.93%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e-6	-1.483e+01	0.0000	219.0	9.77%	52.4	6.99%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e-6	-1.480e+01	0.0000	458.0	20.43%	123.7	16.50%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e-6	-1.478e+01	0.0000	435.0	19.40%	116.9	15.58%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e-6	-1.477e+01	0.0000	33.0	1.47%	4.7	0.62%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e-5	-1.352e+01	0.0000	46.0	2.05%	7.8	1.04%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e-5	-1.290e+01	0.0000	102.0	4.55%	21.9	2.92%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e-5	-1.267e+01	0.0000	227.0	10.12%	56.5	7.53%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e-5	-1.265e+01	0.0000	124.0	5.53%	27.5	3.67%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e-5	-1.224e+01	0.0000	20.0	0.89%	2.9	0.39%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e-5	-1.224e+01	0.0000	20.0	0.89%	2.4	0.32%
Reverb(NR/DR2)/BLRP(RAW)-Reverba-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e-5	-1.224e+01	0.0000	20.0	0.89%	2.4	0.32%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e-5	-1.191e+01	0.0000	211.0	9.41%	52.6	7.02%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer	CYAAAAATAG	1e-5	-1.177e+01	0.0000	151.0	6.74%	35.0	4.67%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e-5	-1.166e+01	0.0000	172.0	7.67%	41.7	5.56%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e-4	-1.108e+01	0.0000	212.0	9.46%	53.0	7.07%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e-4	-1.108e+01	0.0000	13.0	0.58%	0.0	0.00%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e-4	-1.101e+01	0.0000	19.0	0.85%	2.7	0.36%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e-4	-1.101e+01	0.0000	19.0	0.85%	2.6	0.35%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e-4	-1.101e+01	0.0000	19.0	0.85%	2.6	0.35%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e-4	-1.035e+01	0.0001	379.0	16.90%	104.4	13.92%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e-4	-1.006e+01	0.0001	58.0	2.59%	11.2	1.50%
Pax8(Paired/Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e-4	-9.927e+00	0.0001	81.0	3.61%	17.6	2.35%
E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e-4	-9.868e+00	0.0001	377.0	16.82%	104.0	13.87%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e-4	-9.500e+00	0.0002	95.0	4.24%	21.0	2.81%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e-4	-9.313e+00	0.0002	76.0	3.39%	16.7	2.23%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e-3	-9.153e+00	0.0003	216.0	9.63%	56.1	7.48%
PPARE(NR/DR1)/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e-3	-9.153e+00	0.0003	216.0	9.63%	56.1	7.48%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e-3	-9.036e+00	0.0003	259.0	11.55%	69.5	9.27%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e-3	-8.757e+00	0.0004	86.0	3.84%	19.2	2.57%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e-3	-8.389e+00	0.0006	121.0	5.40%	30.0	4.00%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e-2	-6.878e+00	0.0027	161.0	7.18%	43.0	5.73%
CLOCK(HLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e-2	-6.643e+00	0.0033	116.0	5.17%	30.0	4.00%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e-2	-6.627e+00	0.0034	246.0	10.97%	68.4	9.12%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e-2	-6.593e+00	0.0034	102.0	4.55%	25.9	3.45%
GATA:SCL/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e-2	-6.581e+00	0.0034	24.0	1.07%	4.1	0.54%
Usf2(HLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e-2	-6.469e+00	0.0038	77.0	3.43%	18.3	2.44%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer	GCTGTGGTTW	1e-2	-6.164e+00	0.0051	185.0	8.25%	50.4	6.72%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e-2	-5.890e+00	0.0067	537.0	23.95%	161.7	21.57%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e-2	-5.700e+00	0.0080	140.0	6.24%	37.5	5.00%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e-2	-5.557e+00	0.0091	64.0	2.85%	15.1	2.01%
Srebp2(HLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e-2	-5.276e+00	0.0120	18.0	0.80%	3.7	0.49%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e-2	-5.165e+00	0.0133	63.0	2.81%	15.5	2.07%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e-2	-4.767e+00	0.0195	386.0	17.22%	115.9	15.45%
GFY-Staf/Promoters/Homer	RACTACAATTCCCAGAAKGC	1e-2	-4.631e+00	0.0222	29.0	1.29%	6.9	0.92%
GATA-IR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e-1	-4.534e+00	0.0242	17.0	0.76%	3.9	0.52%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e-1	-4.488e+00	0.0252	75.0	3.35%	19.7	2.63%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e-1	-4.463e+00	0.0256	197.0	8.79%	56.9	7.59%
HIF2a(HLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e-1	-4.393e+00	0.0272	125.0	5.58%	34.8	4.64%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e-1	-4.256e+00	0.0309	212.0	9.46%	61.9	8.26%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e-1	-4.112e+00	0.0353	39.0	1.74%	9.0	1.20%
GATA-IR3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e-1	-3.941e+00	0.0416	35.0	1.56%	8.5	1.13%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e-1	-3.878e+00	0.0439	42.0	1.87%	10.6	1.41%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e-1	-3.621e+00	0.0563	237.0	10.57%	70.3	9.37%
USF1(HLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e-1	-3.606e+00	0.0566	102.0	4.55%	28.8	3.84%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e-1	-3.522e+00	0.0610	118.0	5.26%	33.4	4.45%
NPAS2(HLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e-1	-3.483e+00	0.0629	214.0	9.55%	63.7	8.50%
LXRE(NR/DR4)/BLRP(RAW)-LXRb-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e-1	-3.409e+00	0.0672	7.0	0.31%	1.8	0.24%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e-1	-3.336e+00	0.0717	175.0	7.81%	51.4	6.85%
Max(HLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e-1	-3.228e+00	0.0793	136.0	6.07%	39.2	5.23%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e-1	-3.208e+00	0.0802	74.0	3.30%	20.3	2.71%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer	MACAGGAAGT	1e-1	-2.880e+00	0.1105	76.0	3.39%	21.0	2.81%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e-1	-2.643e+00	0.1389	75.0	3.35%	21.3	2.83%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e-1	-2.581e+00	0.1466	35.0	1.56%	9.4	1.26%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e-1	-2.540e+00	0.1516	167.0	7.45%	50.8	6.77%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e-1	-2.492e+00	0.1578	10.0	0.45%	2.1	0.27%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e-1	-2.456e+00	0.1624	179.0	7.98%	54.3	7.25%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e-1	-2.344e+00	0.1802	225.0	10.04%	69.7	9.29%
n-Myc(HLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e0	-2.284e+00	0.1885	159.0	7.09%	48.1	6.41%
PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	-2.284e+00	0.1885	159.0	7.09%	48.9	6.52%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e0	-2.202e+00	0.2031	89.0	3.97%	26.4	3.51%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e0	-2.189e+00	0.2041	47.0	2.10%	13.8	1.84%
bZIP:IRF/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-2.110e+00	0.2192	117.0	5.22%	35.3	4.71%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e0	-2.007e+00	0.2414	333.0	14.85%	105.2	14.03%
ERE(NR/IR3)/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-1.961e+00	0.2509	59.0	2.63%	17.6	2.35%
bHLHE40(HLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-1.779e+00	0.2967	74.0	3.30%	22.2	2.96%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan et al.)/Homer	CCATATATGGNM	1e0	-1.779e+00	0.2967	74.0	3.30%	22.7	3.03%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	-1.700e+00	0.3187	83.0	3.70%	25.9	3.45%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	-1.696e+00	0.3187	5.0	0.22%	1.0	0.13%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	-1.696e+00	0.3187	5.0	0.22%	0.6	0.08%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e0	-1.696e+00	0.3187	5.0	0.22%	0.3	0.04%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e0	-1.689e+00	0.3187	207.0	9.23%	65.4	8.73%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e0	-1.656e+00	0.3217	67.0	2.99%	20.6	2.74%
Mouse_Recombination_Hotspot/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	-1.636e+00	0.3258	12.0	0.54%	3.3	0.44%
Oct4:Sox17/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	-1.621e+00	0.3287	35.0	1.56%	10.4	1.38%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e0	-1.599e+00	0.3336	200.0	8.92%	63.3	8.44%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e0	-1.477e+00	0.3744	409.0	18.24%	132.4	17.66%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e0	-1.428e+00	0.3856	31.0	1.38%	9.7	1.30%
NFkB-p50,p52(RHD)/p50-ChIP-Chip(Schreiber et al.)/Homer	GGGGGAATCCCC	1e0	-1.428e+00	0.3856	31.0	1.38%	10.0	1.33%
Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e0	-1.428e+00	0.3856	31.0	1.38%	9.2	1.23%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e0	-1.331e+00	0.4219	1102.0	49.15%	364.0	48.54%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e0	-1.318e+00	0.4246	437.0	19.49%	142.9	19.06%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-1.302e+00	0.4288	145.0	6.47%	46.7	6.23%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-1.290e+00	0.4311	43.0	1.92%	13.7	1.82%
Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e0	-1.274e+00	0.4354	111.0	4.95%	35.7	4.76%
Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e0	-1.273e+00	0.4354	74.0	3.30%	23.6	3.15%
BMAL1(HLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e0	-1.167e+00	0.4786	347.0	15.48%	113.7	15.16%
NF1:FOXA1/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e0	-1.154e+00	0.4819	14.0	0.62%	4.8	0.64%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e0	-1.153e+00	0.4819	113.0	5.04%	37.0	4.93%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e0	-1.091e+00	0.5069	240.0	10.70%	78.2	10.42%
FXR(NR/IR1)/Liver-FXR-ChIP-Seq(Chong et al.)/Homer	AGGTCANTGACCTB	1e0	-1.085e+00	0.5069	91.0	4.06%	29.7	3.97%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e0	-1.079e+00	0.5069	161.0	7.18%	52.8	7.03%
CTCF-SatelliteElement/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e0	-1.046e+00	0.5206	4.0	0.18%	0.0	0.00%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e0	-1.011e+00	0.5358	69.0	3.08%	22.6	3.01%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e0	-9.777e-01	0.5476	32.0	1.43%	10.2	1.36%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e0	-9.777e-01	0.5476	32.0	1.43%	10.4	1.39%
PAX3:FKHR-fusion(Paired/Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	-7.886e-01	0.6576	46.0	2.05%	15.5	2.06%
c-Myc/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e0	-7.673e-01	0.6679	100.0	4.46%	33.8	4.51%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e0	-7.628e-01	0.6679	133.0	5.93%	44.4	5.92%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e0	-6.949e-01	0.7097	174.0	7.76%	58.1	7.74%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e0	-6.591e-01	0.7314	36.0	1.61%	12.5	1.66%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	-6.356e-01	0.7445	445.0	19.85%	149.4	19.92%
GATA-DR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e0	-6.325e-01	0.7445	15.0	0.67%	6.0	0.80%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e0	-6.223e-01	0.7460	137.0	6.11%	47.0	6.27%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e0	-5.412e-01	0.8044	213.0	9.50%	72.3	9.64%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e0	-4.427e-01	0.8827	383.0	17.08%	130.7	17.43%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e0	-4.300e-01	0.8890	11.0	0.49%	4.3	0.58%
Pax7-longest(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	-3.942e-01	0.9163	8.0	0.36%	3.3	0.44%
ETS:E-box/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e0	-3.626e-01	0.9406	19.0	0.85%	7.4	0.98%
GRE/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-3.623e-01	0.9406	39.0	1.74%	14.9	1.99%
FOXA1:AR/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	-3.141e-01	0.9713	13.0	0.58%	5.2	0.69%
GATA-DR8(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	-3.141e-01	0.9713	13.0	0.58%	6.0	0.80%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e0	-3.073e-01	0.9727	699.0	31.18%	238.5	31.80%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e0	-2.863e-01	0.9880	145.0	6.47%	51.3	6.84%
VDR(NR/DR3)/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	-2.250e-01	1.0000	37.0	1.65%	14.6	1.94%
T1ISRE(IRF)/Ifnb-Exp/Homer	ACTTTCGTTTCT	1e0	-2.231e-01	1.0000	2.0	0.09%	0.9	0.12%
Fox:Ebox(Forkhead:HLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e0	-2.171e-01	1.0000	242.0	10.79%	85.7	11.42%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e0	-1.934e-01	1.0000	42.0	1.87%	16.4	2.19%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-1.834e-01	1.0000	39.0	1.74%	15.4	2.05%
CHR/Cell-Cycle-Exp/Homer	SRGTTTCAAA	1e0	-1.674e-01	1.0000	196.0	8.74%	70.0	9.34%
NFAT:AP1/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e0	-1.496e-01	1.0000	41.0	1.83%	16.7	2.23%
Tbox:Smad/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	-1.494e-01	1.0000	30.0	1.34%	12.7	1.69%
HNF4a(NR/DR1)/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-9.286e-02	1.0000	106.0	4.73%	40.1	5.35%
GRE(NR/IR3)/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-8.438e-02	1.0000	23.0	1.03%	10.3	1.38%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e0	-8.091e-02	1.0000	182.0	8.12%	67.5	9.00%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e0	-7.162e-02	1.0000	442.0	19.71%	157.9	21.05%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e0	-6.850e-02	1.0000	60.0	2.68%	24.1	3.21%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e0	-5.860e-02	1.0000	484.0	21.59%	172.6	23.01%
Pax7-long(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	-5.689e-02	1.0000	5.0	0.22%	3.4	0.45%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-5.538e-02	1.0000	35.0	1.56%	16.0	2.13%
EBNA1(EBV virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	-5.131e-02	1.0000	1.0	0.04%	1.8	0.24%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e0	-4.886e-02	1.0000	582.0	25.96%	206.6	27.55%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	-4.043e-02	1.0000	42.0	1.87%	18.4	2.45%
ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-3.963e-02	1.0000	683.0	30.46%	241.1	32.14%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e0	-3.782e-02	1.0000	480.0	21.41%	172.2	22.96%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson et al.)/Homer	GYCATCMATCAT	1e0	-3.096e-02	1.0000	11.0	0.49%	6.1	0.82%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-2.440e-02	1.0000	453.0	20.21%	164.1	21.89%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e0	-8.201e-03	1.0000	310.0	13.83%	117.9	15.72%
OCT4-SOX2-TCF-NANOG((POU/Homeobox/HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e0	-4.727e-03	1.0000	39.0	1.74%	19.0	2.54%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e0	-3.687e-03	1.0000	51.0	2.27%	24.2	3.22%
PAX5-shortForm(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	-1.636e-03	1.0000	18.0	0.80%	11.6	1.55%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e0	-1.450e-03	1.0000	278.0	12.40%	109.4	14.59%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-4.850e-04	1.0000	667.0	29.75%	247.2	32.97%
TRa(NR)/C17.2-TRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e0	-3.490e-04	1.0000	68.0	3.03%	33.1	4.42%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e0	-2.470e-04	1.0000	447.0	19.94%	172.5	23.00%
RXR(NR/DR1)/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-6.000e-05	1.0000	278.0	12.40%	114.5	15.26%
TR4(NR/DR1)/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	-4.900e-05	1.0000	22.0	0.98%	15.3	2.04%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer	ATTTTCCATT	1e0	-3.600e-05	1.0000	265.0	11.82%	110.5	14.74%
Pax7(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	-3.400e-05	1.0000	28.0	1.25%	18.4	2.45%
SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e0	-3.000e-05	1.0000	1085.0	48.39%	394.9	52.66%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-2.300e-05	1.0000	515.0	22.97%	200.5	26.73%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer	TBGCACGCAA	1e0	-2.000e-06	1.0000	180.0	8.03%	82.9	11.05%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e0	-1.000e-06	1.0000	398.0	17.75%	164.0	21.86%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e0	-1.000e-06	1.0000	370.0	16.50%	153.3	20.44%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-0.000e+00	1.0000	514.0	22.93%	209.2	27.89%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e0	-0.000e+00	1.0000	587.0	26.18%	235.7	31.43%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e0	-0.000e+00	1.0000	318.0	14.18%	140.6	18.75%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e0	-0.000e+00	1.0000	988.0	44.07%	375.4	50.06%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e0	-0.000e+00	1.0000	683.0	30.46%	271.4	36.19%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e0	-0.000e+00	1.0000	490.0	21.86%	207.2	27.63%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e0	-0.000e+00	1.0000	101.0	4.50%	59.2	7.89%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e0	-0.000e+00	1.0000	249.0	11.11%	129.8	17.31%
E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e0	-0.000e+00	1.0000	272.0	12.13%	139.5	18.60%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	0.000e+00	1.0000	828.0	36.93%	383.3	51.11%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	0.000e+00	1.0000	122.0	5.44%	122.5	16.34%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e0	0.000e+00	1.0000	242.0	10.79%	156.1	20.81%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	0.000e+00	1.0000	129.0	5.75%	94.5	12.60%
GLI3(Zf)/GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	0.000e+00	1.0000	28.0	1.25%	32.4	4.32%
Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e0	0.000e+00	1.0000	135.0	6.02%	121.4	16.19%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	0.000e+00	1.0000	156.0	6.96%	94.3	12.58%
NRF1/Promoter/Homer	STGCGCATGCGC	1e0	0.000e+00	1.0000	94.0	4.19%	68.3	9.10%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e0	0.000e+00	1.0000	604.0	26.94%	274.1	36.55%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e0	0.000e+00	1.0000	409.0	18.24%	213.2	28.43%