FastQCFastQC Report
Sat 23 Sep 2023
SRR13269806.TAZ.trimmed.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR13269806.TAZ.trimmed.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44410668
Total Bases3 Gbp
Sequences flagged as poor quality0
Sequence length0-75
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[FAIL]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
42240349.511304806313655No Hit
CGGTTCAGCAGGAATGCCG499830.11254728255832584Illumina Paired End Adapter 2 (100% over 19bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)