Information for motif3


Reverse Opposite:

p-value:1e-582
log p-value:-1.341e+03
Information Content per bp:1.663
Number of Target Sequences with motif9580.0
Percentage of Target Sequences with motif21.10%
Number of Background Sequences with motif5601.9
Percentage of Background Sequences with motif12.43%
Average Position of motif in Targets99.2 +/- 53.3bp
Average Position of motif in Background90.7 +/- 58.4bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.38
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL003.1_GC-box/Jaspar

Match Rank:1
Score:0.95
Offset:-2
Orientation:forward strand
Alignment:--KGGGCGGGGCCW
AGGGGGCGGGGCTG

MA0599.1_KLF5/Jaspar

Match Rank:2
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:KGGGCGGGGCCW
GGGGNGGGGC--

Sp1(Zf)/Promoter/Homer

Match Rank:3
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-KGGGCGGGGCCW
GGGGGCGGGGCC-

MA0079.3_SP1/Jaspar

Match Rank:4
Score:0.93
Offset:-1
Orientation:reverse strand
Alignment:-KGGGCGGGGCCW
GGGGGCGGGGC--

MA0039.2_Klf4/Jaspar

Match Rank:5
Score:0.93
Offset:0
Orientation:forward strand
Alignment:KGGGCGGGGCCW
TGGGTGGGGC--

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:6
Score:0.92
Offset:0
Orientation:forward strand
Alignment:KGGGCGGGGCCW
DGGGYGKGGC--

PB0039.1_Klf7_1/Jaspar

Match Rank:7
Score:0.91
Offset:-3
Orientation:reverse strand
Alignment:---KGGGCGGGGCCW-
NNAGGGGCGGGGTNNA

MA0516.1_SP2/Jaspar

Match Rank:8
Score:0.89
Offset:-5
Orientation:reverse strand
Alignment:-----KGGGCGGGGCCW
GGGNGGGGGCGGGGC--

MA0493.1_Klf1/Jaspar

Match Rank:9
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:KGGGCGGGGCCW
TGGGTGTGGCN-

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.81
Offset:1
Orientation:forward strand
Alignment:KGGGCGGGGCCW
-GGGGGGGG---