Information for motif25


Reverse Opposite:

p-value:1e-18
log p-value:-4.286e+01
Information Content per bp:1.530
Number of Target Sequences with motif50.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif10.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets102.1 +/- 50.1bp
Average Position of motif in Background109.7 +/- 36.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0013.1_Eomes_1/Jaspar

Match Rank:1
Score:0.92
Offset:-2
Orientation:reverse strand
Alignment:--TTTTCACACC-----
NNTTTTCACACCTTNNN

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:2
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:TTTTCACACC-
-KTTCACACCT

MA0009.1_T/Jaspar

Match Rank:3
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:TTTTCACACC---
--TTCACACCTAG

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:4
Score:0.75
Offset:1
Orientation:forward strand
Alignment:TTTTCACACC-
-ATTAACACCT

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TTTTCACACC
HTTTCCCASG

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:TTTTCACACC-
---TGACACCT

PB0044.1_Mtf1_1/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTTTCACACC----
NNTTTGCACACGGCCC

Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TTTTCACACC--
--ATCACCCCAT

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TTTTCACACC-
VDTTTCCCGCCA

CHR/Cell-Cycle-Exp/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TTTTCACACC-
-TTTGAAACCG