Information for motif20


Reverse Opposite:

p-value:1e-37
log p-value:-8.532e+01
Information Content per bp:1.554
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.6 +/- 53.2bp
Average Position of motif in Background131.7 +/- 21.3bp
Strand Bias (log2 ratio + to - strand density)-1.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TTTGTGGGCGTA
NNHTGTGGTTWN-

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TTTGTGGGCGTA
NGCGTGGGCGGR

MA0511.1_RUNX2/Jaspar

Match Rank:3
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----TTTGTGGGCGTA
GGGGTTTGTGGTTTG-

MA0472.1_EGR2/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TTTGTGGGCGTA--
GTGCGTGGGCGGGNG

MA0002.2_RUNX1/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TTTGTGGGCGTA
GTCTGTGGTTT--

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TTTGTGGGCGTA
TGCGTGGGYG--

PB0168.1_Sox14_2/Jaspar

Match Rank:7
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TTTGTGGGCGTA
NNNCCATTGTGTNAN--

PB0143.1_Klf7_2/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTTGTGGGCGTA-----
NNNTNGGGCGTATNNTN

MA0130.1_ZNF354C/Jaspar

Match Rank:9
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TTTGTGGGCGTA
---GTGGAT---

PB0208.1_Zscan4_2/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTTGTGGGCGTA-
NNNNTTGTGTGCTTNN