p-value: | 1e-382 |
log p-value: | -8.796e+02 |
Information Content per bp: | 1.663 |
Number of Target Sequences with motif | 9135.0 |
Percentage of Target Sequences with motif | 20.12% |
Number of Background Sequences with motif | 5889.2 |
Percentage of Background Sequences with motif | 13.06% |
Average Position of motif in Targets | 99.0 +/- 54.3bp |
Average Position of motif in Background | 100.4 +/- 59.2bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.17 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer
Match Rank: | 1 |
Score: | 0.95 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | NNAACAAWGG --RACAAWGG |
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MA0143.3_Sox2/Jaspar
Match Rank: | 2 |
Score: | 0.93 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | NNAACAAWGG --AACAAAGG |
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MA0515.1_Sox6/Jaspar
Match Rank: | 3 |
Score: | 0.93 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | NNAACAAWGG AAAACAATGG |
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Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer
Match Rank: | 4 |
Score: | 0.92 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | NNAACAAWGG RNAACAATGG |
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PB0061.1_Sox11_1/Jaspar
Match Rank: | 5 |
Score: | 0.92 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---NNAACAAWGG---- ATAAGAACAAAGGACTA |
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Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer
Match Rank: | 6 |
Score: | 0.92 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | NNAACAAWGG- -GAACAATGGN |
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MA0442.1_SOX10/Jaspar
Match Rank: | 7 |
Score: | 0.92 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | NNAACAAWGG ---ACAAAG- |
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PB0071.1_Sox4_1/Jaspar
Match Rank: | 8 |
Score: | 0.91 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---NNAACAAWGG---- AGAAGAACAAAGGACTA |
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MA0514.1_Sox3/Jaspar
Match Rank: | 9 |
Score: | 0.90 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | NNAACAAWGG AAAACAAAGG |
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MA0077.1_SOX9/Jaspar
Match Rank: | 10 |
Score: | 0.88 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | NNAACAAWGG -GAACAATGG |
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