Information for motif7


Reverse Opposite:

p-value:1e-263
log p-value:-6.071e+02
Information Content per bp:1.676
Number of Target Sequences with motif3431.0
Percentage of Target Sequences with motif7.56%
Number of Background Sequences with motif1798.2
Percentage of Background Sequences with motif3.99%
Average Position of motif in Targets99.1 +/- 52.7bp
Average Position of motif in Background100.1 +/- 55.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.97
Offset:1
Orientation:forward strand
Alignment:TCWCAGCAGGRG-
-CACAGCAGGGGG

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.93
Offset:-2
Orientation:forward strand
Alignment:--TCWCAGCAGGRG-
CCACACAGCAGGAGA

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.92
Offset:-2
Orientation:forward strand
Alignment:--TCWCAGCAGGRG-
CCACACAGCAGGAGA

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.90
Offset:-2
Orientation:forward strand
Alignment:--TCWCAGCAGGRG-
GAGCACAGCAGGACA

MA0461.1_Atoh1/Jaspar

Match Rank:5
Score:0.73
Offset:3
Orientation:forward strand
Alignment:TCWCAGCAGGRG
---CAGATGGC-

SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:TCWCAGCAGGRG
---CAGCTGNT-

Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:7
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TCWCAGCAGGRG
NAHCAGCTGD--

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TCWCAGCAGGRG
--NCAGCTGCTG

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TCWCAGCAGGRG
TGAGTCAGCA----

MA0522.1_Tcf3/Jaspar

Match Rank:10
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TCWCAGCAGGRG
-CACAGCTGCAG