Information for motif15


Reverse Opposite:

p-value:1e-102
log p-value:-2.366e+02
Information Content per bp:1.783
Number of Target Sequences with motif1212.0
Percentage of Target Sequences with motif2.67%
Number of Background Sequences with motif607.5
Percentage of Background Sequences with motif1.35%
Average Position of motif in Targets101.1 +/- 54.0bp
Average Position of motif in Background103.0 +/- 59.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0055.1_Rfx4_1/Jaspar

Match Rank:1
Score:0.92
Offset:-3
Orientation:reverse strand
Alignment:---GTTGCCATGG--
NNCGTTGCTATGGNN

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.91
Offset:-2
Orientation:reverse strand
Alignment:--GTTGCCATGG
CTGTTGCTAGGS

MA0509.1_Rfx1/Jaspar

Match Rank:3
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:GTTGCCATGG----
GTTGCCATGGNAAC

MA0510.1_RFX5/Jaspar

Match Rank:4
Score:0.88
Offset:-3
Orientation:reverse strand
Alignment:---GTTGCCATGG--
NCTGTTGCCAGGGAG

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:5
Score:0.88
Offset:-3
Orientation:reverse strand
Alignment:---GTTGCCATGG--
NCCGTTGCTANGNGN

MA0600.1_RFX2/Jaspar

Match Rank:6
Score:0.88
Offset:-5
Orientation:reverse strand
Alignment:-----GTTGCCATGG----
NNNCNGTTGCCATGGNAAC

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-GTTGCCATGG---
NGTTGCCATGGCAA

PB0054.1_Rfx3_1/Jaspar

Match Rank:8
Score:0.87
Offset:-7
Orientation:reverse strand
Alignment:-------GTTGCCATGG------
NTNNNNNGTTGCTANGGNNCANA

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-GTTGCCATGG---
GGTTGCCATGGCAA

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.81
Offset:0
Orientation:forward strand
Alignment:GTTGCCATGG-----
GTTGCCATGGCAACM