p-value: | 1e-502 |
log p-value: | -1.157e+03 |
Information Content per bp: | 1.715 |
Number of Target Sequences with motif | 1666.0 |
Percentage of Target Sequences with motif | 3.67% |
Number of Background Sequences with motif | 390.5 |
Percentage of Background Sequences with motif | 0.87% |
Average Position of motif in Targets | 98.4 +/- 51.4bp |
Average Position of motif in Background | 97.3 +/- 62.2bp |
Strand Bias (log2 ratio + to - strand density) | -0.0 |
Multiplicity (# of sites on avg that occur together) | 1.05 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer
Match Rank: | 1 |
Score: | 0.95 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GTTAATCATTAA GGTTAAACATTAA |
|

|
|
MA0153.1_HNF1B/Jaspar
Match Rank: | 2 |
Score: | 0.92 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GTTAATCATTAA GTTAAATATTAA |
|

|
|
MA0046.1_HNF1A/Jaspar
Match Rank: | 3 |
Score: | 0.89 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GTTAATCATTAA- GGTTAATAATTAAC |
|

|
|
PH0051.1_Hoxa4/Jaspar
Match Rank: | 4 |
Score: | 0.74 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GTTAATCATTAA-- CNAGTTAATTAATAANN |
|

|
|
MF0010.1_Homeobox_class/Jaspar
Match Rank: | 5 |
Score: | 0.71 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GTTAATCATTAA ---AATTATT-- |
|

|
|
PH0018.1_Dbx1/Jaspar
Match Rank: | 6 |
Score: | 0.70 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GTTAATCATTAA--- TAATTAATTAATAATTA |
|

|
|
PH0019.1_Dbx2/Jaspar
Match Rank: | 7 |
Score: | 0.69 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GTTAATCATTAA----- -NAATTAATTAATTNNN |
|

|
|
PH0059.1_Hoxb4/Jaspar
Match Rank: | 8 |
Score: | 0.68 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GTTAATCATTAA-- CGCGTTAATTAATTACC |
|

|
|
PH0070.1_Hoxc5/Jaspar
Match Rank: | 9 |
Score: | 0.68 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GTTAATCATTAA-- CGAATTAATTAATTACT |
|

|
|
PH0080.1_Hoxd8/Jaspar
Match Rank: | 10 |
Score: | 0.67 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GTTAATCATTAA------ -TAAATAATTAATGGCTA |
|

|
|