Information for motif13


Reverse Opposite:

p-value:1e-31
log p-value:-7.157e+01
Information Content per bp:1.697
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif0.14%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets119.2 +/- 59.5bp
Average Position of motif in Background137.3 +/- 5.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0468.1_DUX4/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GTGATTACTTGA
-TGATTAAATTA

PH0103.1_Meox1/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GTGATTACTTGA-
GAGGTAATTACCTCAG

PH0081.1_Pdx1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GTGATTACTTGA-
AAGGTAATTAGCTCAT

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GTGATTACTTGA
-TGATTGATGA-

MA0593.1_FOXP2/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GTGATTACTTGA
TNTGTTTACTT--

PH0055.1_Hoxa7_2/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GTGATTACTTGA-
GTAGTAATTAATGGAA

PH0045.1_Hoxa1/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GTGATTACTTGA-
ACGGTAATTAGCTCAG

PH0129.1_Otx1/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GTGATTACTTGA-
AGAGGGGATTAATTTAT

PH0053.1_Hoxa6/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GTGATTACTTGA-
AAGGTAATTACCTAAT

PH0125.1_Obox5_2/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GTGATTACTTGA-
NANAGGGATTAATTATN