Information for motif1


Reverse Opposite:

p-value:1e-465
log p-value:-1.072e+03
Information Content per bp:1.600
Number of Target Sequences with motif4066.0
Percentage of Target Sequences with motif24.26%
Number of Background Sequences with motif3785.6
Percentage of Background Sequences with motif11.46%
Average Position of motif in Targets99.0 +/- 52.4bp
Average Position of motif in Background99.3 +/- 59.1bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:TGTTTRCHTA
TGTTTACTTT

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:2
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:TGTTTRCHTA
TGTTTACTTT

MF0005.1_Forkhead_class/Jaspar

Match Rank:3
Score:0.92
Offset:0
Orientation:forward strand
Alignment:TGTTTRCHTA
TGTTTATTT-

MA0148.3_FOXA1/Jaspar

Match Rank:4
Score:0.90
Offset:-4
Orientation:forward strand
Alignment:----TGTTTRCHTA-
TCCATGTTTACTTTG

Fox:Ebox(Forkhead:HLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.89
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTRCHTA-----
NSTGTTTRCWCAGBNNN

MA0593.1_FOXP2/Jaspar

Match Rank:6
Score:0.89
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTRCHTA
TNTGTTTACTT-

MA0047.2_Foxa2/Jaspar

Match Rank:7
Score:0.88
Offset:0
Orientation:forward strand
Alignment:TGTTTRCHTA--
TGTTTACTTAGG

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:8
Score:0.87
Offset:-3
Orientation:forward strand
Alignment:---TGTTTRCHTA
NYYTGTTTACHN-

MA0157.1_FOXO3/Jaspar

Match Rank:9
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:TGTTTRCHTA
TGTTTACA--

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:10
Score:0.87
Offset:-2
Orientation:forward strand
Alignment:--TGTTTRCHTA
CNTGTTTACATA