Information for motif18


Reverse Opposite:

p-value:1e-14
log p-value:-3.422e+01
Information Content per bp:1.873
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif0.10%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets96.5 +/- 49.7bp
Average Position of motif in Background163.9 +/- 13.7bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0128.1_Gcm1_2/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CAGCCCCGATAC---
NTCNTCCCCTATNNGNN

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CAGCCCCGATAC
CAGCC-------

PB0110.1_Bcl6b_2/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CAGCCCCGATAC
ATCCCCGCCCCTAAAA

MA0597.1_THAP1/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CAGCCCCGATAC
CTGCCCGCA---

PB0151.1_Myf6_2/Jaspar

Match Rank:5
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CAGCCCCGATAC
AGCAACAGCCGCACC--

PB0202.1_Zfp410_2/Jaspar

Match Rank:6
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CAGCCCCGATAC
TCACCCCGCCCCAAATT

MA0155.1_INSM1/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CAGCCCCGATAC-
-CGCCCCCTGACA

Sp1(Zf)/Promoter/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CAGCCCCGATAC-
-GGCCCCGCCCCC

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CAGCCCCGATAC
CACAGN--------

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CAGCCCCGATAC
--GCTCCG----