Information for motif5


Reverse Opposite:

p-value:1e-170
log p-value:-3.930e+02
Information Content per bp:1.615
Number of Target Sequences with motif6381.0
Percentage of Target Sequences with motif38.07%
Number of Background Sequences with motif9278.8
Percentage of Background Sequences with motif28.09%
Average Position of motif in Targets99.8 +/- 55.3bp
Average Position of motif in Background99.3 +/- 59.4bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:1
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-GGTGTTAA-
AGGTGTTAAT

PB0013.1_Eomes_1/Jaspar

Match Rank:2
Score:0.84
Offset:-5
Orientation:forward strand
Alignment:-----GGTGTTAA----
GAAAAGGTGTGAAAATT

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:3
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-GGTGTTAA-
AGGTGTGAAM

MA0009.1_T/Jaspar

Match Rank:4
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---GGTGTTAA
CTAGGTGTGAA

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-GGTGTTAA
AGGTGTCA-

PB0109.1_Bbx_2/Jaspar

Match Rank:6
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---GGTGTTAA------
NNNNCTGTTAACNNTNN

PH0157.1_Rhox11_1/Jaspar

Match Rank:7
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----GGTGTTAA----
AAGACGCTGTAAAGCGA

PH0158.1_Rhox11_2/Jaspar

Match Rank:8
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----GGTGTTAA----
AGGACGCTGTAAAGGGA

PH0164.1_Six4/Jaspar

Match Rank:9
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----GGTGTTAA----
TNNNNGGTGTCATNTNT

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GGTGTTAA--
NBWGATAAGR