Information for motif15


Reverse Opposite:

p-value:1e-16
log p-value:-3.718e+01
Information Content per bp:1.599
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif0.15%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets99.4 +/- 57.0bp
Average Position of motif in Background99.4 +/- 55.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0046.1_HNF1A/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TAGTCAATACTG---
-GGTTAATAATTAAC

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TAGTCAATACTG-----
---CTAATATTGCTAAA

POL002.1_INR/Jaspar

Match Rank:3
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TAGTCAATACTG-
-----NNNANTGA

PB0197.1_Zfp105_2/Jaspar

Match Rank:4
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TAGTCAATACTG---
ATGGTTCAATAATTTTG

PH0062.1_Hoxb7/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TAGTCAATACTG---
GTAGTAATTAATGCAA

MA0078.1_Sox17/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TAGTCAATACTG
--GACAATGNN-

PH0040.1_Hmbox1/Jaspar

Match Rank:7
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------TAGTCAATACTG
GAAAACTAGTTAACATC-

MA0047.2_Foxa2/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---TAGTCAATACTG
NCTAAGTAAACA---

PB0168.1_Sox14_2/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TAGTCAATACTG-
CTCACACAATGGCGC

PB0176.1_Sox5_2/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TAGTCAATACTG---
NNCTNAATTATGANN