Information for motif11


Reverse Opposite:

p-value:1e-48
log p-value:-1.115e+02
Information Content per bp:1.761
Number of Target Sequences with motif121.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif43.1
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets90.9 +/- 52.0bp
Average Position of motif in Background88.9 +/- 55.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0117.1_Eomes_2/Jaspar

Match Rank:1
Score:0.79
Offset:-4
Orientation:forward strand
Alignment:----AGGTGGCGCT--
GCGGAGGTGTCGCCTC

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------AGGTGGCGCT----
GCCASCAGGGGGCGCYVNNG

PB0076.1_Sp4_1/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----AGGTGGCGCT---
NNNAAGGGGGCGGGNNN

MA0139.1_CTCF/Jaspar

Match Rank:4
Score:0.64
Offset:-8
Orientation:forward strand
Alignment:--------AGGTGGCGCT-
TGGCCACCAGGGGGCGCTA

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGGTGGCGCT
AGGTGTCA--

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AGGTGGCGCT
NNCAGGTGNN---

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer

Match Rank:7
Score:0.61
Offset:-8
Orientation:reverse strand
Alignment:--------AGGTGGCGCT--
TGGCCACCAGGTGGCACTNT

PB0112.1_E2F2_2/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AGGTGGCGCT-----
NNNNTTGGCGCCGANNN

PB0009.1_E2F3_1/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AGGTGGCGCT--
ATAAGGGCGCGCGAT

PB0113.1_E2F3_2/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AGGTGGCGCT-----
NNNNTTGGCGCCGANNN