Information for motif8


Reverse Opposite:

p-value:1e-57
log p-value:-1.329e+02
Information Content per bp:1.595
Number of Target Sequences with motif521.0
Percentage of Target Sequences with motif3.11%
Number of Background Sequences with motif466.1
Percentage of Background Sequences with motif1.41%
Average Position of motif in Targets104.9 +/- 51.6bp
Average Position of motif in Background99.2 +/- 59.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax7-long(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:1
Score:0.91
Offset:0
Orientation:forward strand
Alignment:TAATCCGATTAG
TAATCHGATTAC

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:2
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:TAATCCGATTAG
TAATYNRATTAR

PH0126.1_Obox6/Jaspar

Match Rank:3
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---TAATCCGATTAG
CNATAATCCGNTTNT

PH0025.1_Dmbx1/Jaspar

Match Rank:4
Score:0.73
Offset:-5
Orientation:reverse strand
Alignment:-----TAATCCGATTAG
NNNATTAATCCGNTTNA

MA0467.1_Crx/Jaspar

Match Rank:5
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TAATCCGATTAG
CTAATCCTCTT--

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:6
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TAATCCGATTAG
GCTAATCC------

PH0035.1_Gsc/Jaspar

Match Rank:7
Score:0.68
Offset:-6
Orientation:forward strand
Alignment:------TAATCCGATTAG
AATCGTTAATCCCTTTA-

PB0185.1_Tcf1_2/Jaspar

Match Rank:8
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TAATCCGATTAG
NNTAATCCNGNCNN

MA0468.1_DUX4/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TAATCCGATTAG
TAATTTAATCA-

PH0015.1_Crx/Jaspar

Match Rank:10
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TAATCCGATTAG
AGGCTAATCCCCAANG