Information for motif20


Reverse Opposite:

p-value:1e-9
log p-value:-2.229e+01
Information Content per bp:1.559
Number of Target Sequences with motif260.0
Percentage of Target Sequences with motif1.55%
Number of Background Sequences with motif339.3
Percentage of Background Sequences with motif1.03%
Average Position of motif in Targets94.3 +/- 58.2bp
Average Position of motif in Background91.2 +/- 63.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0481.1_FOXP1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TTTTGTTTTCTT---
CTTTGTTTACTTTTN

PB0182.1_Srf_2/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TTTTGTTTTCTT--
NNNNTTTTTTTTTNAAC

PB0123.1_Foxl1_2/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTTTGTTTTCTT--
NNTTTTGTTTTGATNT

MA0029.1_Mecom/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTTTGTTTTCTT
TNTTATCTTATCTT

PB0015.1_Foxa2_1/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTTTGTTTTCTT---
NNNTTTGTTTACTTTTN

MA0517.1_STAT2::STAT1/Jaspar

Match Rank:6
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----TTTTGTTTTCTT
TCAGTTTCATTTTCC-

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTTTGTTTTCTT
RSTTTCRSTTTC--

PB0017.1_Foxj3_1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTTTGTTTTCTT---
NNNTTTGTTTACNTTNN

MA0514.1_Sox3/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTTTGTTTTCTT
CCTTTGTTTT---

PB0018.1_Foxk1_1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTTTGTTTTCTT---
NNNTTTGTTTACATTTN