Information for motif19


Reverse Opposite:

p-value:1e-12
log p-value:-2.782e+01
Information Content per bp:1.970
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets101.9 +/- 50.1bp
Average Position of motif in Background88.3 +/- 34.9bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0168.1_Sox14_2/Jaspar

Match Rank:1
Score:0.79
Offset:-3
Orientation:forward strand
Alignment:---ACACAATTGC--
CTCACACAATGGCGC

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-ACACAATTGC
RNAACAATGG-

PB0165.1_Sox11_2/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----ACACAATTGC
NNCNNAACAATTNT

PB0183.1_Sry_2/Jaspar

Match Rank:4
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----ACACAATTGC--
TCACGGAACAATAGGTG

PH0024.1_Dlx5/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---ACACAATTGC---
NANNGNTAATTACCNN

MA0077.1_SOX9/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ACACAATTGC
GAACAATGG-

MA0084.1_SRY/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ACACAATTGC
GTAAACAAT---

PB0066.1_Sox17_1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ACACAATTGC---
ATAAACAATTAAACA

PB0175.1_Sox4_2/Jaspar

Match Rank:9
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----ACACAATTGC---
TNCNNAACAATTTTTNC

PH0009.1_Bsx/Jaspar

Match Rank:10
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ACACAATTGC---
NTNAGNTAATTACCTN