Information for motif1


Reverse Opposite:

p-value:1e-104
log p-value:-2.415e+02
Information Content per bp:1.665
Number of Target Sequences with motif76.0
Percentage of Target Sequences with motif18.81%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.66%
Average Position of motif in Targets927.2 +/- 992.5bp
Average Position of motif in Background2019.9 +/- 756.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0056.1_MZF1_1-4/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CCCCGCGGTC
TCCCCA-----

PB0102.1_Zic2_1/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CCCCGCGGTC--
CCCCCCCGGGGGGGT

PB0204.1_Zfp740_2/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CCCCGCGGTC--
AAATTCCCCCCGGAAGT

PB0103.1_Zic3_1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CCCCGCGGTC--
CCCCCCCGGGGGGGT

MA0079.3_SP1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCCCGCGGTC
GCCCCGCCCCC

Sp1(Zf)/Promoter/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCCCGCGGTC
GGCCCCGCCCCC

PB0010.1_Egr1_1/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CCCCGCGGTC
TCCGCCCCCGCATT-

MA0516.1_SP2/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCCCGCGGTC----
GCCCCGCCCCCTCCC

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CCCCGCGGTC-
TCCCNNGGGACN

MA0469.1_E2F3/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCCCGCGGTC----
CTCCCGCCCCCACTC