Information for motif12


Reverse Opposite:

p-value:1e-32
log p-value:-7.448e+01
Information Content per bp:1.823
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif11.39%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif1.04%
Average Position of motif in Targets1003.9 +/- 1380.9bp
Average Position of motif in Background1347.5 +/- 644.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CGCAGTCTCC
--CTGTCTGG

MA0506.1_NRF1/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CGCAGTCTCC
TGCGCAGGCGC-

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CGCAGTCTCC
VBSYGTCTGG

PB0203.1_Zfp691_2/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CGCAGTCTCC------
TACGAGACTCCTCTAAC

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CGCAGTCTCC
-GCTGTG---

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CGCAGTCTCC------
NTNNCGTATCCAAGTNN

MA0056.1_MZF1_1-4/Jaspar

Match Rank:7
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CGCAGTCTCC-
-----TCCCCA

MA0117.1_Mafb/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CGCAGTCTCC
-GCTGACGC-

MA0498.1_Meis1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CGCAGTCTCC-----
AGCTGTCACTCACCT

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CGCAGTCTCC
TGCTGACTCA