Information for motif19


Reverse Opposite:

p-value:1e-23
log p-value:-5.362e+01
Information Content per bp:1.530
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif10.40%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif1.50%
Average Position of motif in Targets902.6 +/- 1239.4bp
Average Position of motif in Background755.4 +/- 343.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0039.1_Klf7_1/Jaspar

Match Rank:1
Score:0.89
Offset:-4
Orientation:forward strand
Alignment:----CCACGCCC----
TCGACCCCGCCCCTAT

MA0039.2_Klf4/Jaspar

Match Rank:2
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-CCACGCCC-
GCCCCACCCA

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:3
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-CCACGCCC-
GCCMCRCCCH

MA0493.1_Klf1/Jaspar

Match Rank:4
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--CCACGCCC-
GGCCACACCCA

MA0599.1_KLF5/Jaspar

Match Rank:5
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-CCACGCCC-
GCCCCGCCCC

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-CCACGCCC-
GCCACACCCA

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:7
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--CCACGCCC--
GGCCACACCCAN

PB0180.1_Sp4_2/Jaspar

Match Rank:8
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----CCACGCCC---
NNGGCCACGCCTTTN

POL003.1_GC-box/Jaspar

Match Rank:9
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---CCACGCCC---
NAGCCCCGCCCCCN

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:10
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:CCACGCCC
-CACGCA-