Information for motif21


Reverse Opposite:

p-value:1e-23
log p-value:-5.334e+01
Information Content per bp:1.827
Number of Target Sequences with motif60.0
Percentage of Target Sequences with motif14.85%
Number of Background Sequences with motif9.7
Percentage of Background Sequences with motif3.26%
Average Position of motif in Targets921.1 +/- 811.7bp
Average Position of motif in Background1059.7 +/- 725.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CGTAGGGC--
TCACCTCTGGGCAG

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CGTAGGGC--
TTGCCCTAGGGCAT

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CGTAGGGC--
CCGCCCAAGGGCAG

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CGTAGGGC--
GCCTCAGGGCAT

MA0003.2_TFAP2A/Jaspar

Match Rank:5
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------CGTAGGGC-
CATTGCCTCAGGGCA

MA0597.1_THAP1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CGTAGGGC--
-TNNGGGCAG

PB0199.1_Zfp161_2/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CGTAGGGC--
GCCGCGCAGTGCGT

PB0133.1_Hic1_2/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CGTAGGGC------
NNNNTTGGGCACNNCN

MA0057.1_MZF1_5-13/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CGTAGGGC---
-GGAGGGGGAA

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CGTAGGGC--
SCCTSAGGSCAW