Information for motif22


Reverse Opposite:

p-value:1e-22
log p-value:-5.230e+01
Information Content per bp:1.555
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif6.19%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets873.4 +/- 1093.8bp
Average Position of motif in Background533.7 +/- 87.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.81
Offset:0
Orientation:forward strand
Alignment:TTTWAAAAAAAA-----
GTTAAAAAAAAAAATTA

PB0116.1_Elf3_2/Jaspar

Match Rank:2
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-TTTWAAAAAAAA----
GTTCAAAAAAAAAATTC

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-TTTWAAAAAAAA-
TACTGGAAAAAAAA

PB0148.1_Mtf1_2/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TTTWAAAAAAAA-
AAATAAGAAAAAAC

PH0078.1_Hoxd13/Jaspar

Match Rank:5
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TTTWAAAAAAAA-
CTACCAATAAAATTCT

PH0075.1_Hoxd10/Jaspar

Match Rank:6
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TTTWAAAAAAAA--
AATGCAATAAAATTTAT

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TTTWAAAAAAAA
NCYAATAAAA---

PH0057.1_Hoxb13/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TTTWAAAAAAAA-
AACCCAATAAAATTCG

PB0093.1_Zfp105_1/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TTTWAAAAAAAA---
AACAAACAACAAGAG

PH0056.1_Hoxa9/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TTTWAAAAAAAA-
ACGGCCATAAAATTAAT