Information for motif25


Reverse Opposite:

p-value:1e-20
log p-value:-4.803e+01
Information Content per bp:1.530
Number of Target Sequences with motif47.0
Percentage of Target Sequences with motif11.63%
Number of Background Sequences with motif7.0
Percentage of Background Sequences with motif2.34%
Average Position of motif in Targets1034.9 +/- 1321.5bp
Average Position of motif in Background1253.0 +/- 514.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0147.1_Max_2/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CGCCACGCTTCC-
GTGCCACGCGACTG

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.62
Offset:6
Orientation:forward strand
Alignment:CGCCACGCTTCC
------GCTTCC

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CGCCACGCTTCC
---CACGCA---

PB0180.1_Sp4_2/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CGCCACGCTTCC-
NNGGCCACGCCTTTN

PB0164.1_Smad3_2/Jaspar

Match Rank:5
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------CGCCACGCTTCC
TACGCCCCGCCACTCTG--

MA0164.1_Nr2e3/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CGCCACGCTTCC
---CAAGCTT--

MA0473.1_ELF1/Jaspar

Match Rank:7
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CGCCACGCTTCC------
-----CACTTCCTGNTTC

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CGCCACGCTTCC---
-----NRYTTCCGGH

PAX5-shortForm(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CGCCACGCTTCC---
-GTCACGCTCNCTGA

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:10
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CGCCACGCTTCC---
-----CACTTCCTGT