Information for motif27


Reverse Opposite:

p-value:1e-18
log p-value:-4.354e+01
Information Content per bp:1.530
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif10.15%
Number of Background Sequences with motif5.5
Percentage of Background Sequences with motif1.86%
Average Position of motif in Targets1045.4 +/- 1246.7bp
Average Position of motif in Background1150.1 +/- 792.7bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0056.1_MZF1_1-4/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CGGGGAGAGATC
TGGGGA------

PB0204.1_Zfp740_2/Jaspar

Match Rank:2
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CGGGGAGAGATC
ANTNCCGGGGGGAANTT

PB0126.1_Gata5_2/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CGGGGAGAGATC-----
GACAGAGATATCAGTGT

RXR(NR/DR1)/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CGGGGAGAGATC-
TAGGGCAAAGGTCA

MA0065.2_PPARG::RXRA/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CGGGGAGAGATC-
GTAGGGCAAAGGTCA

PB0107.1_Ascl2_2/Jaspar

Match Rank:6
Score:0.55
Offset:-7
Orientation:reverse strand
Alignment:-------CGGGGAGAGATC
NATNGGGNGGGGANAN---

PPARE(NR/DR1)/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CGGGGAGAGATC-
TGGGGCAAAGGTCA

PB0140.1_Irf6_2/Jaspar

Match Rank:8
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CGGGGAGAGATC
NNNACCGAGAGTNNN-

POL011.1_XCPE1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CGGGGAGAGATC
--GGGCGGGACC

MA0504.1_NR2C2/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CGGGGAGAGATC-
AGGGGTCAGAGGTCA