Information for motif30


Reverse Opposite:

p-value:1e-15
log p-value:-3.615e+01
Information Content per bp:1.530
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif9.16%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif1.80%
Average Position of motif in Targets971.4 +/- 1211.9bp
Average Position of motif in Background1199.1 +/- 714.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0056.1_MZF1_1-4/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:ATCCCCACCG
-TCCCCA---

PB0107.1_Ascl2_2/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--ATCCCCACCG----
CTATCCCCGCCCTATT

PH0015.1_Crx/Jaspar

Match Rank:3
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------ATCCCCACCG
AGGCTAATCCCCAANG

MA0599.1_KLF5/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:ATCCCCACCG-
-GCCCCGCCCC

PB0167.1_Sox13_2/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ATCCCCACCG-----
ANNTNCCCACCCANNAC

PB0204.1_Zfp740_2/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ATCCCCACCG-----
AAATTCCCCCCGGAAGT

PH0129.1_Otx1/Jaspar

Match Rank:7
Score:0.61
Offset:-8
Orientation:reverse strand
Alignment:--------ATCCCCACCG
NNNAATTAATCCCCNCN-

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ATCCCCACCG
--CCCCCCCC

MA0079.3_SP1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ATCCCCACCG--
-GCCCCGCCCCC

MA0039.2_Klf4/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ATCCCCACCG-
-GCCCCACCCA