Information for motif32


Reverse Opposite:

p-value:1e-13
log p-value:-3.116e+01
Information Content per bp:1.807
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif6.68%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif1.34%
Average Position of motif in Targets653.3 +/- 910.6bp
Average Position of motif in Background4520.1 +/- 2104.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.77
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-WKAKWGWGAGRG--
NNNACCGAGAGTNNN

MA0508.1_PRDM1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:WKAKWGWGAGRG---
AGAAAGTGAAAGTGA

PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:WKAKWGWGAGRG-
-GAAAGTGAAAGT

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-WKAKWGWGAGRG
NTGATTGACAGN-

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:WKAKWGWGAGRG
TGAGTGACAGSC

PB0139.1_Irf5_2/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-WKAKWGWGAGRG--
TTGACCGAGAATTCC

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.53
Offset:4
Orientation:forward strand
Alignment:WKAKWGWGAGRG--
----TGCGTGGGYG

PB0107.1_Ascl2_2/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:WKAKWGWGAGRG-----
-NATNGGGNGGGGANAN

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:WKAKWGWGAGRG---
-----TTGAGTGSTT

MA0599.1_KLF5/Jaspar

Match Rank:10
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:WKAKWGWGAGRG--
----GGGGNGGGGC