Information for motif34


Reverse Opposite:

p-value:1e-12
log p-value:-2.806e+01
Information Content per bp:1.874
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif7.18%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif1.42%
Average Position of motif in Targets878.0 +/- 1221.7bp
Average Position of motif in Background643.6 +/- 549.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.72
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0127.1_Gata6_2/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CRCTATCA-----
GCGGCGATATCGCAGCG

PB0105.1_Arid3a_2/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CRCTATCA-----
ACCCGTATCAAATTT

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CRCTATCA
YSTTATCT

PB0128.1_Gcm1_2/Jaspar

Match Rank:4
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------CRCTATCA---
NTCNTCCCCTATNNGNN

PH0161.1_Six1/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CRCTATCA-----
GATGGGGTATCATTTTT

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CRCTATCA--
TGGTTTCAGT

MA0508.1_PRDM1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CRCTATCA------
TCACTTTCACTTTCN

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CRCTATCA--
YCTTATCWVN

PH0166.1_Six6_2/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CRCTATCA-----
AATAGGGTATCAATATT

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CRCTATCA
AGGTCTCTAACC