Information for motif35


Reverse Opposite:

p-value:1e-10
log p-value:-2.477e+01
Information Content per bp:1.761
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif3.71%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets505.7 +/- 745.2bp
Average Position of motif in Background812.3 +/- 196.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:ACTGCTGCAGTG-----
NNNANTGCAGTGCNNTT

PB0195.1_Zbtb3_2/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ACTGCTGCAGTG----
NNNNTGCCAGTGATTG

MA0522.1_Tcf3/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ACTGCTGCAGTG
CACAGCTGCAG--

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:4
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:ACTGCTGCAGTG--
----CTYRAGTGSY

PB0050.1_Osr1_1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ACTGCTGCAGTG---
TNNTGCTACTGTNNNN

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ACTGCTGCAGTG---
TNTCCTGCTGTGNNG

PB0051.1_Osr2_1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ACTGCTGCAGTG---
CNNNGCTACTGTANNN

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ACTGCTGCAGTG
CCCCCTGCTGTG

MA0122.1_Nkx3-2/Jaspar

Match Rank:9
Score:0.56
Offset:5
Orientation:forward strand
Alignment:ACTGCTGCAGTG--
-----TTAAGTGGA

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ACTGCTGCAGTG---
NNTCCTGCTGTGNNN