Information for motif36


Reverse Opposite:

p-value:1e-10
log p-value:-2.375e+01
Information Content per bp:1.728
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif9.41%
Number of Background Sequences with motif8.6
Percentage of Background Sequences with motif2.90%
Average Position of motif in Targets1034.5 +/- 1647.2bp
Average Position of motif in Background1792.6 +/- 1225.5bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.76
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0013.1_Eomes_1/Jaspar

Match Rank:1
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----CAGTGTGAAA---
GAAAAGGTGTGAAAATT

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CAGTGTGAAA-
-CSTGGGAAAD

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CAGTGTGAAA
AGGTGTGAAM

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CAGTGTGAAA-
-GGCGGGAARN

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CAGTGTGAAA
AGGTGTTAAT

PB0044.1_Mtf1_1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CAGTGTGAAA---
GGGCCGTGTGCAAAAA

bZIP:IRF/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:7
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----CAGTGTGAAA---
WNAGTCADAVTGAAACTN

PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CAGTGTGAAA--
GAAAGTGAAAGT

MA0009.1_T/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CAGTGTGAAA
CTAGGTGTGAA-

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CAGTGTGAAA--
TGGCGGGAAAHB