Information for motif5


Reverse Opposite:

p-value:1e-41
log p-value:-9.558e+01
Information Content per bp:1.608
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif13.37%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif1.04%
Average Position of motif in Targets867.2 +/- 788.7bp
Average Position of motif in Background1523.3 +/- 1404.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GCTCGGCTCGCC
NNGCNCTGCGCGGC

PB0009.1_E2F3_1/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCTCGGCTCGCC-----
--ANCGCGCGCCCTTNN

PB0008.1_E2F2_1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCTCGGCTCGCC-----
--NTCGCGCGCCTTNNN

POL001.1_MTE/Jaspar

Match Rank:4
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------GCTCGGCTCGCC-
NCGACCGCTCCGCTCGAAA

POL006.1_BREu/Jaspar

Match Rank:5
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GCTCGGCTCGCC
----AGCGCGCC

Sp1(Zf)/Promoter/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCTCGGCTCGCC
GGCCCCGCCCCC-

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GCTCGGCTCGCC
----NGCTN---

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCTCGGCTCGCC
GCTCCG------

PB0180.1_Sp4_2/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GCTCGGCTCGCC----
-NNGGCCACGCCTTTN

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GCTCGGCTCGCC------
-TACGCCCCGCCACTCTG