Information for motif6


Reverse Opposite:

p-value:1e-41
log p-value:-9.547e+01
Information Content per bp:1.957
Number of Target Sequences with motif78.0
Percentage of Target Sequences with motif19.31%
Number of Background Sequences with motif9.0
Percentage of Background Sequences with motif3.02%
Average Position of motif in Targets903.1 +/- 660.8bp
Average Position of motif in Background791.9 +/- 623.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.36
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:GGTCGGAG-
---CGGAGC

PB0202.1_Zfp410_2/Jaspar

Match Rank:2
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------GGTCGGAG---
NNTNNGGGGCGGNGNGN

Sp1(Zf)/Promoter/Homer

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GGTCGGAG--
GGGGGCGGGGCC

MA0504.1_NR2C2/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GGTCGGAG----
AGGGGTCAGAGGTCA

POL003.1_GC-box/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GGTCGGAG---
AGGGGGCGGGGCTG

MA0079.3_SP1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GGTCGGAG-
GGGGGCGGGGC

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGTCGGAG
GGGGGGGG

MA0599.1_KLF5/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGTCGGAG-
GGGGNGGGGC

PB0110.1_Bcl6b_2/Jaspar

Match Rank:9
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------GGTCGGAG--
NNTNAGGGGCGGNNNN

PB0039.1_Klf7_1/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GGTCGGAG----
NNAGGGGCGGGGTNNA