Information for motif7


Reverse Opposite:

p-value:1e-40
log p-value:-9.217e+01
Information Content per bp:1.530
Number of Target Sequences with motif84.0
Percentage of Target Sequences with motif20.79%
Number of Background Sequences with motif10.8
Percentage of Background Sequences with motif3.62%
Average Position of motif in Targets951.6 +/- 923.0bp
Average Position of motif in Background1575.3 +/- 948.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.49
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0117.1_Mafb/Jaspar

Match Rank:1
Score:0.66
Offset:6
Orientation:forward strand
Alignment:GGCGGCGCTGAC--
------GCTGACGC

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GGCGGCGCTGAC
AGGGGGCGGGGCTG--

PB0164.1_Smad3_2/Jaspar

Match Rank:3
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------GGCGGCGCTGAC
NAGANTGGCGGGGNGNA-

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GGCGGCGCTGAC---
-----TGCTGACTCA

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GGCGGCGCTGAC
GGGGGCGGGGCC---

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GGCGGCGCTGAC---
---GGTGYTGACAGS

MA0079.3_SP1/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GGCGGCGCTGAC
GGGGGCGGGGC----

MA0516.1_SP2/Jaspar

Match Rank:8
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------GGCGGCGCTGAC
GGGNGGGGGCGGGGC----

PB0039.1_Klf7_1/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GGCGGCGCTGAC
NNAGGGGCGGGGTNNA-

PB0076.1_Sp4_1/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----GGCGGCGCTGAC
NNNAAGGGGGCGGGNNN