Information for motif13


Reverse Opposite:

p-value:1e-16
log p-value:-3.892e+01
Information Content per bp:1.713
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif6.14%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets133.6 +/- 71.6bp
Average Position of motif in Background164.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CCAGAGGTYCTR-
AAGGCCAGATGGTCCGG

PB0049.1_Nr2f2_1/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCAGAGGTYCTR--
TCTCAAAGGTCACGAG

MA0091.1_TAL1::TCF3/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCAGAGGTYCTR
AACAGATGGTCN-

POL005.1_DPE/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CCAGAGGTYCTR
---GAAGATGTT

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCAGAGGTYCTR---
ATCCACAGGTGCGAAAA

PB0053.1_Rara_1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCAGAGGTYCTR--
TCTCAAAGGTCACCTG

MA0113.2_NR3C1/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CCAGAGGTYCTR
AGAACAGAATGTTCT-

PB0090.1_Zbtb12_1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CCAGAGGTYCTR------
-CTAAGGTTCTAGATCAC

MA0512.1_Rxra/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CCAGAGGTYCTR
-CAAAGGTCAGA

ETS(ETS)/Promoter/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CCAGAGGTYCTR
AACCGGAAGT----