Information for motif18


Reverse Opposite:

p-value:1e-15
log p-value:-3.552e+01
Information Content per bp:1.458
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif7.22%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.83%
Average Position of motif in Targets117.2 +/- 67.5bp
Average Position of motif in Background142.9 +/- 71.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0511.1_RUNX2/Jaspar

Match Rank:1
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CCACATCACCAA
CAAACCACAAACCCC-

MA0073.1_RREB1/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCACATCACCAA------
CCCCAAACCACCCCCCCCCA

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CCACATCACCAA
NWAACCACADNN----

ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCACATCACCAA
ACCACATCCTGT-

PB0122.1_Foxk1_2/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CCACATCACCAA
CAAACAACAACACCT-

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCACATCACCAA
AAACCACAGC-----

PH0134.1_Pbx1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CCACATCACCAA---
TCACCCATCAATAAACA

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CCACATCACCAA
AAACCACANN-----

PB0120.1_Foxj1_2/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CCACATCACCAA
ATGTCACAACAACAC

MA0002.2_RUNX1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CCACATCACCAA
AAACCACAGAN----