Information for motif2


Reverse Opposite:

p-value:1e-24
log p-value:-5.547e+01
Information Content per bp:1.720
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif7.94%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.56%
Average Position of motif in Targets127.5 +/- 89.3bp
Average Position of motif in Background214.1 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AGTGWGARGACA
GAAAGTGAAAGT---

PB0021.1_Gata3_1/Jaspar

Match Rank:2
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----AGTGWGARGACA-----
TTTTTAGAGATAAGAAATAAAG

MA0508.1_PRDM1/Jaspar

Match Rank:3
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----AGTGWGARGACA
AGAAAGTGAAAGTGA-

MA0057.1_MZF1_5-13/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGTGWGARGACA
GGAGGGGGAA----

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGTGWGARGACA
AGGTGTGAAM---

PB0124.1_Gabpa_2/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---AGTGWGARGACA-
NNNNGGGGGAAGANGG

MA0482.1_Gata4/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AGTGWGARGACA
NNGAGATAAGA--

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AGTGWGARGACA-
---GGGAGGACNG

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGTGWGARGACA
GGCGGGAARN--

MA0471.1_E2F6/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGTGWGARGACA
GGGCGGGAAGG--