Information for motif21


Reverse Opposite:

p-value:1e-14
log p-value:-3.290e+01
Information Content per bp:1.652
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif6.86%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.84%
Average Position of motif in Targets174.6 +/- 67.5bp
Average Position of motif in Background183.2 +/- 34.4bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:ATABTCAGTT
--TGTCGGTT

MA0100.2_Myb/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:ATABTCAGTT--
--TGGCAGTTGN

BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:ATABTCAGTT--
--BRRCVGTTDN

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:ATABTCAGTT--
--TGGCAGTTGG

Pax7(Paired/Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ATABTCAGTT-
-TAATCAATTA

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:6
Score:0.62
Offset:3
Orientation:forward strand
Alignment:ATABTCAGTT-
---GGCVGTTR

PB0150.1_Mybl1_2/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ATABTCAGTT-----
CACGGCAGTTGGTNN

PB0149.1_Myb_2/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ATABTCAGTT-----
NNNTGGCAGTTGGTNN

ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ATABTCAGTT--
AGTTTCAGTTTC

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ATABTCAGTT--
ACTTTCACTTTC