Information for motif23


Reverse Opposite:

p-value:1e-14
log p-value:-3.270e+01
Information Content per bp:1.833
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif5.42%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets134.6 +/- 73.4bp
Average Position of motif in Background223.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0480.1_Foxo1/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TCTTGTTAAC-
TCCTGTTTACA

PH0040.1_Hmbox1/Jaspar

Match Rank:2
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----TCTTGTTAAC---
GAAAACTAGTTAACATC

PH0168.1_Hnf1b/Jaspar

Match Rank:3
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---TCTTGTTAAC----
ANNNCTAGTTAACNGNN

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:4
Score:0.71
Offset:1
Orientation:forward strand
Alignment:TCTTGTTAAC---
-CNTGTTTACATA

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:5
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TCTTGTTAAC--
NYYTGTTTACHN

MA0084.1_SRY/Jaspar

Match Rank:6
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TCTTGTTAAC
-ATTGTTTAN

MA0031.1_FOXD1/Jaspar

Match Rank:7
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TCTTGTTAAC
--ATGTTTAC

PB0081.1_Tcf1_1/Jaspar

Match Rank:8
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TCTTGTTAAC-----
NNNTTAGTTAACTNANN

MA0030.1_FOXF2/Jaspar

Match Rank:9
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TCTTGTTAAC-----
-NTTGTTTACGTTNN

PB0109.1_Bbx_2/Jaspar

Match Rank:10
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TCTTGTTAAC-----
NNNNCTGTTAACNNTNN