Information for motif24


Reverse Opposite:

p-value:1e-14
log p-value:-3.270e+01
Information Content per bp:1.661
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif5.42%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.50%
Average Position of motif in Targets196.2 +/- 88.0bp
Average Position of motif in Background78.4 +/- 23.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0160.1_NR4A2/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:AAGTGTCCTC
--GTGACCTT

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AAGTGTCCTC--
--CNGTCCTCCC

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AAGTGTCCTC--
--CTGTTCCTGG

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AAGTGTCCTC
---TGACCT-

PB0072.1_Sox5_1/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----AAGTGTCCTC--
NNTTTATTGTTCTNNN

TRa(NR)/C17.2-TRa-ChIP-Seq(GSE38347)/Homer

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AAGTGTCCTC--------
---TGWCCTCARNTGACC

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AAGTGTCCTC--
--CTGACCTTTG

MA0122.1_Nkx3-2/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AAGTGTCCTC
TTAAGTGGA---

MA0512.1_Rxra/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AAGTGTCCTC--
-NCTGACCTTTG

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AAGTGTCCTC--
--NTGACCTTGA